Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01212 ATGCATGGTTTTATTGCGGAATCTGATGAAACAAATCGTTCTCAGAACTCTTTTCTTGATTCTCCTGTAGTCACTCTTGAGAAAGCTGACATCCAATTTTGGAAGCTCATCATCTTCCTTTTTCTGCTTGACAATGACACCTCTTGGATGATTCTTCTAAGCTCTGGAGTTGGTTTGATCATTGAGCTCTGGAAAATTGGAAAAGCCATGCACATAGAGATTGATAGAACAGGAAGGATACCTATGTTAAGGTTCCGGGATCGAGAGTCATATGAAGGGAATAAGACAAAAGAGTATGATGACATTGCAATGAAGTATTTAACCTATGTTCTATTTCTCCTTGCTGCTGGCTTTGCTGCTTACTCACTAATACTCGGGACAAAACCAGATCAGTTGGCAGCCGTGGCGTATTCCAGAATACAGAAAGAGCTTGCCAGAGATGGTAGAGAGCTGGGTTATAAGTCCAATGAGGTGCACAACAAATCTATTTCAAAAAAGCTGTCCAATGCAGGATCTGCcaccaaaacaaaaaAGAAGACTGCTCTATTACAATTCTGCATAGATCTCACTGCCCGCGCAAGTTTAGGACTAATTGATCCAGCTATTGGCTGA 612 0.4052 MHGFIAESDETNRSQNSFLDSPVVTLEKADIQFWKLIIFLFLLDNDTSWMILLSSGVGLIIELWKIGKAMHIEIDRTGRIPMLRFRDRESYEGNKTKEYDDIAMKYLTYVLFLLAAGFAAYSLILGTKPDQLAAVAYSRIQKELARDGRELGYKSNEVHNKSISKKLSNAGSATKTKKKTALLQFCIDLTARASLGLIDPAIG 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01212 203 PANTHER CLEFT LIP AND PALATE ASSOCIATED TRANSMEMBRANE PROTEIN-RELATED 35 125 IPR008429 GO:0016021
Tsu07g01212 203 Pfam Cleft lip and palate transmembrane protein 1 (CLPTM1) 33 124 IPR008429 GO:0016021
Tsu07g01212 203 PANTHER BNAA09G05230D PROTEIN 35 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01212 Tsu-Chr7 10435764 10438262 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01212 - - sly:101245548 154.836