Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01182 ATGGATAGTGGTGGTTTTCTTCTATGTCCATTGTTTTTACTCTTCTTGTTTTGGTGTATTATTTCATCTGAATCACAGTTCATAAGATATAATACTACCTCAACCATTGTTCCTGGGAAGCTTAATGTtcatttggttgctcatactcatGATGATGTTGGATGGTTGAAAACTGTTGATCAGTACTATGTTGGTTCCAATAACTCCATTCAGGGAGCATGCGTTCAAAATGTGCTTGATTCTCTTATACCGGCTTTGTTAGCGGACAAGAATCGTAAATTCATCTATGTTGAACAGGCATTCTTCCAGCGTTGGTGGAGAGAACAAAGTGAAGTTGTTAAGAAAACAGTCAAGCAGCTGGTCAAATCTGGTCAATTGGAATTCATAAATGGAGGTATGTGTATGCATGATGAGGCTGCTACACATTACATTGACATGATTGATCAGACAACTCTTGGACATCGATTCATCAAAGACGAATTCGGCATAACTCCAAGAATAGGATGGCAAATTGATCCATTTGGACATTCTGCAGTGCAGGCCTACTTGTTGGGAGCAGAGGTTGGATTTGACTCTTTATTCTTTGGACGGATCGACTACCAAGACCGAGCTAAGAGAAAAGGTGAAAAAAGTCTTGAAGTTGTGTGGCAGGGTTCTAAGACCTTTGGTTCATCTGCACAGATATTTTCTGATGCGTTCCCTGAGAATTATGAACCTCCCAGTAATTTCTACTATGAAGTAGATAGCGATGCTCCGATTGTTCAGGACGATATCAATTTGTTTGACTACAATGTCCCTCAAAGAGTAAATGAGTTCGTCGCAGCTGCAATATCACAGGCCAATATAACGCGCACAAATCATATAATGTGGACAATGGGGACAGATTTCCAGTACCAATATGCACAAACCTGGTTTAGGCAACTGGACAAATTTATTAACTATGTTAATCAGGATGGACGAGTTCATGCCTTATACTCGACACCGTCAATATATACTGATGCAAAACATGCTGCAAATGAAGCCTGGCCAATTAAGACGGATGACTATTTTCCGTATGCTGATCGTGTAAATGGCTACTGGACGGGGTATTTTACAAGTAGGCCAGCACTGAAAGGTTATGTTAGATTGTTGAGTGGTTACTACTTGGCAGCAAGGCAATTGGAGTATTTCAAAGGGAAGAGTGCCTCAGGTCCTAATACTGAATCTTTGGCTGATGCTTTGGCTATTGCTCAACACCACGATGCGGTATCTGGTACATCAAAGCAGCATGTGGCTAATGATTATGCAAAACGGCTTTCAATAGGTTACACTGAGACTGAGAAAGCTGTTTCGGCATCACTTGCTTTCTTGACAGAGGCCGCAAACAAAACTCGTCATAGGACTCCAAAGATTCAATTTCAACAGTGTCCACTTCTTAACATAAGTTACTGTCCTGCATCAGAAGCTGACTTCTCAGATGGGAAAAATCTGGTTATCGTCGTTTACAATCCTCTTGGATGGAAAAGAGAGGATGTTATAAGGATTCCTGTTGCCaatgaaaatgttgttgttCGAGATTCCAGCGGGAAAGAAATCCAATCCCAGCTGCTGCCAATACCTGATTATATTCATGGTTTAAGAAATTACCATGCTGCAGCATACCTAGGAGTATCTCCAAGTGTAGACCCTAAATATTGGCTTGCTTTTTCCGCTATTGTTCCCCCACTTGGTTTTAGCACTTACTATGTGTCAAAAGATAAACAAGCAGCTACTATTTCAGATAGACATATAGGATATAGATCAGGGAGTCCGAACGATACATTTGAAGTAGGCCTAGGAAACTTGAAACTTATTTACTCTGGGAAGGAAGGGAAACTTACTCAATATATCAACAGAAAAAGGAAGGTCAAAGAATCTCTAGACCAGACATACAAGTATTATGCCTCATATGGAGATGACTTTACAGCAAATGCTCAGGCGTCTGGAGCATATATTTTTCGCCCCAATGGTTCATCAATTCAAATCAATCCCAACGGAAGGtCTCCTATCACAGTTTTGCGAGGACCAATCGTGCATGAAGTGCATCAGCAGATCAATTCATGGATATACCAGACCACCAGATTGTTCAAAGGAAAAGAGCATGCTGAAGTTGAGTTTATCGTTGGACCTATACCGATTGACAATGGAATTGGCAAAGAAATTGCAACCGAGATTAAAACAAATCTAACAAGCAGCAAAACCTTCTATACTGATTCTAATGGACGTGATTTCATCGAACGAGTTCGAGACTATAGAAAAGACTGGAACTTGGAAGTGAATCAACCTGTTGCCGGAAATTACTACCCTATCAATCTTGGAATTTACCTAAAAGATAACAGCAGAGAGTTTTCTGTATTGGTAGATAGGTCTGTGGGCGGTTCCAGCATCTTAGATGGACAATTAGAGCTAATGGTTCATAGGAGGATACTTAATGATGATTCCAGAGGTGTTGCAGAGGCACTAAACGAAACAGTCTGCGTCTCTAATAAGTGCACAGGCTTAACAGTTTTAGGGAAGTACTATTTCAGAATTGATCCTGTAGGAGAGGGCGCTAGATGGCGTAGAACATTTGGTCAAGAGATATACTCTCCATTTCTTTTAGCCTTCGCAGAGAGTGAAGGTAACTGGGGAGATTCTCATGTCACAAAGTTCTCGGGAATAGATTCCTCATACAGCTTACCAGAAAATGTTGCAATAATAACCCTCCAGGATCTTGGCGATGGAAAAATTCTCCTTCGGCTGGCGCACTTATATGAGATTGGCGAGGACGCGCATCTCTCAGTTAAGTCAAGTGTAGAGCTTAAAAAGGTGTTCCACAATAAACAGATAAACAAAGTAACTGAGGtgagcttatcagctaaccaaGAAAGAGCAGGAATGGAGAGGAAGAGATTAGTGTGGCAAGTTAAAGGGTCATCTCGAGAACCACAGGTGTCTAGGGGAGGACCAGTTGATCCAGAAAAGCTAATTGTCGAACTCGCTCCCATGGAAATAAGGAcctttattatcaatattaacCAATAA 3042 0.4017 MDSGGFLLCPLFLLFLFWCIISSESQFIRYNTTSTIVPGKLNVHLVAHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSLIPALLADKNRKFIYVEQAFFQRWWREQSEVVKKTVKQLVKSGQLEFINGGMCMHDEAATHYIDMIDQTTLGHRFIKDEFGITPRIGWQIDPFGHSAVQAYLLGAEVGFDSLFFGRIDYQDRAKRKGEKSLEVVWQGSKTFGSSAQIFSDAFPENYEPPSNFYYEVDSDAPIVQDDINLFDYNVPQRVNEFVAAAISQANITRTNHIMWTMGTDFQYQYAQTWFRQLDKFINYVNQDGRVHALYSTPSIYTDAKHAANEAWPIKTDDYFPYADRVNGYWTGYFTSRPALKGYVRLLSGYYLAARQLEYFKGKSASGPNTESLADALAIAQHHDAVSGTSKQHVANDYAKRLSIGYTETEKAVSASLAFLTEAANKTRHRTPKIQFQQCPLLNISYCPASEADFSDGKNLVIVVYNPLGWKREDVIRIPVANENVVVRDSSGKEIQSQLLPIPDYIHGLRNYHAAAYLGVSPSVDPKYWLAFSAIVPPLGFSTYYVSKDKQAATISDRHIGYRSGSPNDTFEVGLGNLKLIYSGKEGKLTQYINRKRKVKESLDQTYKYYASYGDDFTANAQASGAYIFRPNGSSIQINPNGRSPITVLRGPIVHEVHQQINSWIYQTTRLFKGKEHAEVEFIVGPIPIDNGIGKEIATEIKTNLTSSKTFYTDSNGRDFIERVRDYRKDWNLEVNQPVAGNYYPINLGIYLKDNSREFSVLVDRSVGGSSILDGQLELMVHRRILNDDSRGVAEALNETVCVSNKCTGLTVLGKYYFRIDPVGEGARWRRTFGQEIYSPFLLAFAESEGNWGDSHVTKFSGIDSSYSLPENVAIITLQDLGDGKILLRLAHLYEIGEDAHLSVKSSVELKKVFHNKQINKVTEVSLSANQERAGMERKRLVWQVKGSSREPQVSRGGPVDPEKLIVELAPMEIRTFIININQ 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01182 1013 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 902 1008 IPR041147 -
Tsu07g01182 1013 Gene3D - 601 869 - -
Tsu07g01182 1013 SUPERFAMILY Glycoside hydrolase/deacetylase 30 354 IPR011330 GO:0005975
Tsu07g01182 1013 SUPERFAMILY Galactose mutarotase-like 462 1011 IPR011013 GO:0003824|GO:0005975|GO:0030246
Tsu07g01182 1013 Pfam Glycosyl hydrolases family 38 C-terminal domain 606 821 IPR011682 GO:0004559|GO:0006013
Tsu07g01182 1013 SMART Alpha_mann_mid_2 358 432 IPR015341 GO:0004559|GO:0006013
Tsu07g01182 1013 SUPERFAMILY Families 57/38 glycoside transferase middle domain 357 451 IPR028995 -
Tsu07g01182 1013 PANTHER ALPHA-MANNOSIDASE 21 1012 - -
Tsu07g01182 1013 PANTHER ALPHA-MANNOSIDASE 21 1012 - -
Tsu07g01182 1013 Gene3D Glycoside hydrolase 38, N terminal domain 41 321 IPR027291 -
Tsu07g01182 1013 Gene3D Glycoside hydrolase family 38, central domain 401 457 IPR037094 GO:0004559|GO:0006013
Tsu07g01182 1013 Pfam Alpha mannosidase middle domain 359 450 IPR015341 GO:0004559|GO:0006013
Tsu07g01182 1013 CDD GH38N_AMII_LAM_like 41 317 - -
Tsu07g01182 1013 Gene3D - 479 594 IPR013780 -
Tsu07g01182 1013 Gene3D - 887 1013 - -
Tsu07g01182 1013 Pfam Glycosyl hydrolases family 38 N-terminal domain 42 353 IPR000602 GO:0004559|GO:0006013
Tsu07g01182 1013 Gene3D Glycoside hydrolase family 38, central domain 322 400 IPR037094 GO:0004559|GO:0006013
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01182 Tsu-Chr7 10091493 10098974 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01182 1 925 Glycoside Hydrolase AT5G13980 67.991 0.0 1318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01182 K01191 - gmx:100798150 1727.99