Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01171 ATGGACCGGAGAAGAACCGAAAGTCCAGTTTACACGCGGCAGTGGAGCGGTAATTCCAGCAGCACCGGTTCATCATCTCCGGTTATGTCACCGGCTCATCCTCAATCACGGCTTGGTCCTACTTCTACCGGTCTCTCCACCATCAAACGCACTCAAAACGTGGCTGCTAAAGCCGCTGCGCAACGCCTGGCTCGCGCTATGGCGTCTCGAACCGTTGATGATGacgaagatgaagatgatgatcttGACTTCCGTTTCAGTGCTCCGACTTCAACCGCTTTTTCTTCTATCTCAAGAACTAAAAGCTCTGGTGCTGATGCTCCCACCGTTCCTCCAATTTCGCTCGCGAGACCAAATAGATCTCCTTCTCCTGCGTTAGGTCGGAACTTTGTAGAGCATACTCAATCAGTTCGTTCATCATCAGCTGGAAGACCGGCAGTTTCTTCAGTTCGGTCATTACCGGTGGTGGCACCTCCTAAATCCACTATCCGAACACCTATGGCTGTACCTCCAATTGATCCTCCTACCAATAGAAATAAAGAGAAGAGGTTTCCGCCAGACCTCACTGGCAGGCAACTTAACTCCAAAGACACAGGAGATCAGCGTGAAGCTTCTGCACTCCGTGATGAACTTGATATGCTACAAGAAGCGAATGACGATTTATTAGAAAAGCTAAGACTAGCAGAGGAAAAACGCCAAGAAGTGGAGATCAGATCCAGGGAACTCGAGAAACAGGTTGCTTCTCTTGGAGAAGGTGTATCGCTGGAAGCCAAACTGCTGAGCAGGAAAGAAGCTGCTTTGCGTCAAAGAGAGGCTGCTCTCATGGCTGCAAAACAAACACGGAGTGAAAGGGATGAGGATCTCACAGCCCTTCGCGTTGAAATTCAGAATCTAAAAGATGACGCTGCAGCAGCAGAGGAACAACGGCAAGAAGCCGAAGCCGAAGCAAAGGCTCTTCGAACAATGACACAGAGAATGATTTTGACCCAAGAAGAAATGGAGGAAGTGGTCCTGAAGAGATGTTGGCTTGCCCGCTACTGGGGTCTTTCTGTAAAACATGGCATATGTGCAGATATAGCACAGTCCAAGTATGAACATTGGTCTTCTTTAGCTCCTCTTCCGTTTGAACTTGTCATCTCTGCTGGACAAAAGGCCAAGGAGGAATCTTGGAACAAAAGTGCTGATGGTTCAGATAGAAGCCAAAGTGTTCGTGATTTGAATGATCTTGCGGGGGAAGGAAACATAGAGAGTATGCTTTCAGTTGAGATGGGTTTGAGGGAACTTGCTTCTTTAAAGgTTGAGGATGCCGTTGTGCTTGCATTAGCCCAACACAGACGCCCAAATTTGATTCGGCAGTCTCTTTTAGatTCCAAATCACCTGGTGATGCCAAATATTCGGAAGCATTCGAATTAAGTGAAGAGGAAGCCGAAGACGTTCTTTTCAAAGAGGCGTGGTTAACTTATTTCTGGAGGAGAGCTTTATTTCATGGTGTGGAAGAAGATATTGCAGAAGACAGGCTTCAGTTTTGGATTGCCCGCAGCGGACAGTCACCAACTTCACATGATGCTGTTGATGGTAAGCTCATCATTCTTATCATCTTCTTTTCTGGTTCCGAAAAGTGA 1623 0.4664 MDRRRTESPVYTRQWSGNSSSTGSSSPVMSPAHPQSRLGPTSTGLSTIKRTQNVAAKAAAQRLARAMASRTVDDDEDEDDDLDFRFSAPTSTAFSSISRTKSSGADAPTVPPISLARPNRSPSPALGRNFVEHTQSVRSSSAGRPAVSSVRSLPVVAPPKSTIRTPMAVPPIDPPTNRNKEKRFPPDLTGRQLNSKDTGDQREASALRDELDMLQEANDDLLEKLRLAEEKRQEVEIRSRELEKQVASLGEGVSLEAKLLSRKEAALRQREAALMAAKQTRSERDEDLTALRVEIQNLKDDAAAAEEQRQEAEAEAKALRTMTQRMILTQEEMEEVVLKRCWLARYWGLSVKHGICADIAQSKYEHWSSLAPLPFELVISAGQKAKEESWNKSADGSDRSQSVRDLNDLAGEGNIESMLSVEMGLRELASLKVEDAVVLALAQHRRPNLIRQSLLDSKSPGDAKYSEAFELSEEEAEDVLFKEAWLTYFWRRALFHGVEEDIAEDRLQFWIARSGQSPTSHDAVDGKLIILIIFFSGSEK 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01171 540 PANTHER FAS-BINDING FACTOR-LIKE PROTEIN 1 525 IPR040321 GO:0000911
Tsu07g01171 540 Coils Coil 288 325 - -
Tsu07g01171 540 Coils Coil 204 245 - -
Tsu07g01171 540 MobiDBLite consensus disorder prediction 10 47 - -
Tsu07g01171 540 PANTHER MYOSIN 1 525 - -
Tsu07g01171 540 MobiDBLite consensus disorder prediction 1 47 - -
Tsu07g01171 540 MobiDBLite consensus disorder prediction 161 203 - -
Tsu07g01171 540 MobiDBLite consensus disorder prediction 95 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01171 Tsu-Chr7 10028764 10034826 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01171 1 525 EF-hand Containing Proteins AT5G13260 55.926 1.34e-171 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01171 - - aprc:113865708 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01171 07 10028764 10034826 Tsu07g01171 07 10028764 10034826 ECH