Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01159 ATGCATCCTCCGGCGCCGGCGACGGCGAACTTAGACGGTGCAACCGCCGGAAATACACTTAATCCTTCGTTGATCAGAACTTATCGCGCTTGGAAAGGCAATAACgTATTTTTTCTTCGAGGGAGGATTATATTTGGACCAGATGTGAAATCTATATTTACAACACTATTTCTTGTGATTGCTCCTGTTGCTGTTTTTTGTGCTTTTGTTGCTAGAAAATTGTTGGATGATTTTCCTCATCATTCTGgatattcaattttgattatagTTATTATTCACACAATCTTTGTTCTGATTGCCCTTGTACTGACCTCAGGAAGAGATCCTGGCATAGTGCCCCGCAATTCTTATCCTCCAGTTCCAGAAGAATATGATGGAAGTGTCAGTATCAACAGTGAGCAAAATCTACCGCCACAATTACCAAGATCCAAGGAAGTAATTATAAATGGAATAGCTGTGAAAGTAAAATATTGTGATACCTGCATGCTGTATAGACCTCCTCGCTGTTCTCATTGTTCAATATGCGATAACTGCGTGGAGCGATTTGATCATCACTGCCCATGGGTGGGCCAGTGTATTGGACTGCGAAATTATCGGTTCTACTACATCTTTGTTTTCTCTGCAACCCTTCTTTGCATATATATTCATGGATTTTGCTGGGTCTACATCAAGAGGATCCAGAATTCAGAGGAGATATCAATTTGGAAAGCAATGATCAAAACCCCTGCTTCCATTGCACTAATAATATACAGCTTCTTTTGTATCTGGTTTGTTGGAGGACTCACTGTATTTCATACATATCTAATCAGCACAAACCAGTCTACTTATGAAAATTTTAGATACCGGTATGACCGACAAGTCAACCCTTATAACAAAGGGATAGTTGAGAATTTCAAAGAAGTATTCTTCTCTTCCATTCCTCCATCCAAAAACAATTTCAGGTCTAAGGTTCCAATTCCTAAAGAATCGACAGAATCATCTAGAAGAAGGGGTGTTGATACCCTTATGATGCCAGTTTATAATGAGGTTGAGGAGGTTGGAAAAGATTATAAAGATGAGGAATATGGCAAGGGTAGTGAATTAAGTGATACATCTGTGGATTTAAACGGTATGCTTCACACAGAAAGGGGGCAGAGACAAGTTGCTTCCTTTCTAAGGCAGTCCTTGTGGGAAAGAAGCAGCAGAAAATGGGAAGTAACTCCTGAAGTTCTCGACGAGATACATGTAGATGTGGAATCAAAGCAGATCACCGGTGATAGTAGTAAAGAGACCGGTGACAACACAACAAAAACGGATCAATAA 1302 0.3963 MHPPAPATANLDGATAGNTLNPSLIRTYRAWKGNNVFFLRGRIIFGPDVKSIFTTLFLVIAPVAVFCAFVARKLLDDFPHHSGYSILIIVIIHTIFVLIALVLTSGRDPGIVPRNSYPPVPEEYDGSVSINSEQNLPPQLPRSKEVIINGIAVKVKYCDTCMLYRPPRCSHCSICDNCVERFDHHCPWVGQCIGLRNYRFYYIFVFSATLLCIYIHGFCWVYIKRIQNSEEISIWKAMIKTPASIALIIYSFFCIWFVGGLTVFHTYLISTNQSTYENFRYRYDRQVNPYNKGIVENFKEVFFSSIPPSKNNFRSKVPIPKESTESSRRRGVDTLMMPVYNEVEEVGKDYKDEEYGKGSELSDTSVDLNGMLHTERGQRQVASFLRQSLWERSSRKWEVTPEVLDEIHVDVESKQITGDSSKETGDNTTKTDQ 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01159 433 MobiDBLite consensus disorder prediction 412 433 - -
Tsu07g01159 433 PANTHER S-ACYLTRANSFERASE 18 425 - -
Tsu07g01159 433 ProSiteProfiles DHHC domain profile. 156 206 - -
Tsu07g01159 433 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 18 425 - -
Tsu07g01159 433 Pfam DHHC palmitoyltransferase 156 280 IPR001594 GO:0016409
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01159 Tsu-Chr7 9907590 9911193 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01159 85 318 Lipid Metabolism Gene Families AT4G22750 28.295 1.30e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01159 - - mtr:MTR_3g098840 742.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01159 07 9907590 9911193 Tsu07g01159 07 9907590 9911193 ECH