Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01157 ATGTCGTCCCACCATAGCCATCTATCTTTTGCTTTTGGAGTGCTAGGCAACATTTCATCCTTCGTGTGCTTTTTGGCACCACTACCAACATTTCGTAGAGTTTGTAAGAAAAAATCAACCGAAGGGTTTCAATCAATTCCTTATGTGGCTGCACTATTTAGTGCAATGCTTTGGCTTTTTTATGCTTATATGAAGACCGGTGAAACTCTTCTTATCACCATTAATGCATTCGGTTGTGTGATTGAGACCATTTACCTTGCCATTTATGTCACATACTGCCCCAAGAAAGTTAGGATGTCGACATTGAGGATGATCGTGTTGATGAACTTTGTGGGATTTGGTGCGATTGTCGTGTTAACTCATGTCATATTTGAAAAAGAAGATCAACGTCTCAAGCTTCTTGGATGGATTTGTGTAGTTTTTGCCACCAGTGTTTTTGCAGCTCCTTTAAGTATTATTAGGGTTGTTATTCGTACCAGAAGCGTAGAGTTTCTTCCATTTCCTCTTTCACTTCTCCTTCTCATAAGCGCCGTTATGTGGCTCTTGTATGGTCTTTCACTAAAAGATATCTATGTTACGCTCCCGAACGTTGTGGGGTTAACATTTGGAATTGTTCAAATCACACTATACGCAATGTACAGAAACAGTAAACCAGTAAATGATGAAAAGTTACCAGAACACAAAGGAGATATTATCAACAACAATGAATTAGAAACAACAACAACGAACAATGATGAGAAGAAAATTGACATAGAAATTgttgagaaaaaagaagaagagaaacatGAGCAAGTGACTGAGGAAAAAACAGAGGAAAAAGACAACATTAATATTAAGAAGAAAACAGAGGAAGTAACTAAGGGTGGTTGTGAAGATTAA 879 0.3663 MSSHHSHLSFAFGVLGNISSFVCFLAPLPTFRRVCKKKSTEGFQSIPYVAALFSAMLWLFYAYMKTGETLLITINAFGCVIETIYLAIYVTYCPKKVRMSTLRMIVLMNFVGFGAIVVLTHVIFEKEDQRLKLLGWICVVFATSVFAAPLSIIRVVIRTRSVEFLPFPLSLLLLISAVMWLLYGLSLKDIYVTLPNVVGLTFGIVQITLYAMYRNSKPVNDEKLPEHKGDIINNNELETTTTNNDEKKIDIEIVEKKEEEKHEQVTEEKTEEKDNINIKKKTEEVTKGGCED 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01157 292 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 7 279 - -
Tsu07g01157 292 PANTHER RAG1-ACTIVATING PROTEIN 1 7 279 - -
Tsu07g01157 292 MobiDBLite consensus disorder prediction 258 292 - -
Tsu07g01157 292 Coils Coil 255 275 - -
Tsu07g01157 292 Pfam Sugar efflux transporter for intercellular exchange 11 96 IPR004316 GO:0016021
Tsu07g01157 292 Pfam Sugar efflux transporter for intercellular exchange 133 217 IPR004316 GO:0016021
Tsu07g01157 292 Gene3D - 129 224 - -
Tsu07g01157 292 Gene3D - 11 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01157 Tsu-Chr7 9875402 9877646 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01157 1 283 Miscellaneous Gene Families AT5G50800 51.361 2.73e-94 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01157 K15382 - gmx:100810426 390.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g00528 02 4462291 4465417 Tsu07g01157 07 9875402 9877646 ECH
Tsu07g01157 07 9875402 9877646 Tsu07g01157 07 9875402 9877646 ECH
Tsu02g00528 02 4462291 4465417 Tsu07g01157 07 9875402 9877646 PCT