Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01148 ATGGCTACAATCAACAACATTGGGTTACAATTTCAAGGGAATTGGAATTTgagcaatgcaaagaaggaaaATGTGATTAATTATTCTCATGATCACAACAATAACACAATATTGAAGAATAATAAAAGAAGATTTTCATTGGTGATTACAAGTTGTAATCATAATCATGGTAGGACTTATAATAAAGTGGATACAATTAATGGAACAAAGGTGAATGGTTTACAAGTGGTAGATGctccaaaaaaattgtcaaatgaAAATACAACAGATGTTGCTCTTGTTACAAATGGAAAATTTGTTGAAGGAAGGTTTGTTTTTAGACAGATTTTTGTTATTAGGTCTTATGAAATTGGTCCAGATAGAACTGCCACCATGGAGACACTCATGAATTTTCTTCAGgAAACTGCTCTAAATCATGTTACCAGCTCGGGGATAGGAGGAGATGGATTTGGAGCTACTCGCGAGATGAGCCTTAGGAAACTCATTTGGGTCGTTACTCGTATTCAGGTTCAAGTGCAAAGATATAGCAAATGGGgagaagaaattgaaattgatacTTGGGTGGATGCAGCGGGGAAGAATGGAATGCGAAGAGATTGGATAATAAGAGATCGTTGTACGAAAGAGATCATAACTAAAGCAACAAGCACATGGGTGATAATGAATAGAGAAACCAGAAGATTATCAAAGATACCTGAAGAAGTTAGAAGAGAGCTTTCTCCTTTTTACATTCATAAGATTGCTGTAGCTAGCGAAGAAAGAGATTGCGAAAAGATAGACAAACTTACTGATGACACTGCTGAGAGTACAAGATCTGGTTTGGCTCCAAGGTGGAATGACATGGATGTTAACCAACATGTGAACAATGTGAAATACATTGGATGGATTTTAGAGAGTGTGCCAATAAAAGTACTAGAAGATTGTAACATGACAAGCATGACATTAGAGTTTAGGCGTGAATGTACACAAACAAATATGTTGGAATCCATGACATGTCCAACAGAGAGAGTGATAGGTGAATCTGATAATAATTCAGTCAATAGAAAACCTGATCTTCAATACACACACCTTCTTCGTCTACAAGACGATAAAAGAGACGTTGTTCGAGCTAGATCTGAATGGAATTTAAAGCAAAGTCAACAATCATAA 1149 0.3429 MATINNIGLQFQGNWNLSNAKKENVINYSHDHNNNTILKNNKRRFSLVITSCNHNHGRTYNKVDTINGTKVNGLQVVDAPKKLSNENTTDVALVTNGKFVEGRFVFRQIFVIRSYEIGPDRTATMETLMNFLQETALNHVTSSGIGGDGFGATREMSLRKLIWVVTRIQVQVQRYSKWGEEIEIDTWVDAAGKNGMRRDWIIRDRCTKEIITKATSTWVIMNRETRRLSKIPEEVRRELSPFYIHKIAVASEERDCEKIDKLTDDTAESTRSGLAPRWNDMDVNQHVNNVKYIGWILESVPIKVLEDCNMTSMTLEFRRECTQTNMLESMTCPTERVIGESDNNSVNRKPDLQYTHLLRLQDDKRDVVRARSEWNLKQSQQS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01148 382 Gene3D Hotdog Thioesterase 97 380 - -
Tsu07g01148 382 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 104 249 IPR029069 -
Tsu07g01148 382 Pfam Acyl-ACP thioesterase 105 375 IPR002864 GO:0006633|GO:0016790
Tsu07g01148 382 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 261 374 IPR029069 -
Tsu07g01148 382 CDD 4HBT 106 222 - -
Tsu07g01148 382 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 34 380 - -
Tsu07g01148 382 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 34 380 IPR045023 GO:0006633|GO:0016297
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01148 Tsu-Chr7 9774625 9777692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01148 97 377 Acyl Lipid Metabolism Gene Families AT1G08510 55.872 1.13e-108 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01148 K10781 - gmx:100791281 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01148 07 9774625 9777692 Tsu07g01148 07 9774625 9777692 ECH