Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01142 ATGGAGGAACCACCGTGTTCGTCATCGGAGAGATCAAGCACCAAAGGAAAACTCTCAATCAATCCGATCATCGGTATCACCTTACTGAACGATGATCTTCTCCACAACATTTTCACCAGACTTCCAGCTCCATCGTTCGCTTCTGCATCTTGCGTTAACAAATCGTGGAATTCCGTTTGCAATCGCATCATTTCTCGTCCTAAACTCTCTTCTGCACTTTCTCTCAATCCTTCGCTCCGCGACGCTGTGAATGAGGTTGTTAACAAGGTTCTATCTGAGCCAATTCGACCTCATTTTGCTATTGTCAATATTGGAAGAGGATTCGATTCGAACAAGATTCTACGCCTTATTAGACGGAGATTGGGGTTCAAGATTCCGGTTGTTGTCACGATGAATAATGGTGTTATTGGAAGGGATGCTCTTACTAATGAATTTAAagagGTAAAATGGGGTGCTCTTTTTAGTGGCATTGGTGACGAAGAATATGCAACAAATATAAATGAAGGGATAGTTTTGACAGTTGGCTACTTGCCAGGATTAAAAGTTGAAGCTATACCGTTACTACGACCACTGAAGACACCTCAAGAACCATCTGTTGATAAATTTGTAATGGCTATCAAGGAATATTCAGCCTCTGTCTCTGGTCGCCAATTCCCTGTTGGGGTTATATTATTTGGAGACGCAAGCAGTGACATGAAACTGGTTGTGGAGAAGTTGGATTATGCCATGCCTACAGACACGTTCATTGTGGGTGATGAGAGAGGCTGCTCTTTATTCGGATATGGAAATGATGCTAGAAATGTCTGTGGTAGTAGAGGGTACATAGAAGCTGTTGCTCTTGTATTTGCTCAGGACCGAAACAGGTCTTCTGGAAATATTAGATTTCATGTTGCATTCTCAAATGGTGTTTCACCTGTGGGTGGCAGATACAAAGCAGCTTCAGTTAGAACAAACAACACCGATTGCTCAACATGGCTAACTGCCAAAAGGGAAGGTCATCAAGAACTTCTTGATGGTCAGACTATTCTGCATGATATTACCACTTTGCTGGAAAATCATATTGAGCCTCCTGAGTTGTACATCGGAGTAACTAAACACAGGAAAGTTTCCATTGGAGCAGAGAGGCCAATGCCAAAAACTTGTATTGCATATCATGGAGTTGTGGGAGGTGATGAAGAGTATCTATATGTTGATGGAATGGGCATCAAAACAGGAGATATCTTTCAGTTCTACTATTCAGATCCTAATGTTGCATTAGCTTCATTAACTGATGTTCGTGATGCCCTTAACAAAGTTAAGCTGGAGAGGAATTCTAGGAGTTTTGAGGGTGATGGAGACAATGCTACCAATGTTTTCGGTGGTATTATTTTTGCTTGCTATGGACGTGGCGAATCATTTTTCGGACGTCATAATGCTGATAGCTCCCCCTTCTTGGAGACTTTTCCAGGAGTGCCATTGGGTGGAGTATTTTGTGGTGGTGAAATGGTGCGTCCTTCTACCAATTTGGTTGGTCTATGTTCAGATGCAAAGCCTATCAGTTGCTTTTTGCATGTTTATAGCACTGTCTATTTAGTGATGTCATATGATCCTCCTCCCTCTGTGGAATATTAG 1611 0.4196 MEEPPCSSSERSSTKGKLSINPIIGITLLNDDLLHNIFTRLPAPSFASASCVNKSWNSVCNRIISRPKLSSALSLNPSLRDAVNEVVNKVLSEPIRPHFAIVNIGRGFDSNKILRLIRRRLGFKIPVVVTMNNGVIGRDALTNEFKEVKWGALFSGIGDEEYATNINEGIVLTVGYLPGLKVEAIPLLRPLKTPQEPSVDKFVMAIKEYSASVSGRQFPVGVILFGDASSDMKLVVEKLDYAMPTDTFIVGDERGCSLFGYGNDARNVCGSRGYIEAVALVFAQDRNRSSGNIRFHVAFSNGVSPVGGRYKAASVRTNNTDCSTWLTAKREGHQELLDGQTILHDITTLLENHIEPPELYIGVTKHRKVSIGAERPMPKTCIAYHGVVGGDEEYLYVDGMGIKTGDIFQFYYSDPNVALASLTDVRDALNKVKLERNSRSFEGDGDNATNVFGGIIFACYGRGESFFGRHNADSSPFLETFPGVPLGGVFCGGEMVRPSTNLVGLCSDAKPISCFLHVYSTVYLVMSYDPPPSVEY 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01142 536 Pfam FIST N domain 108 317 IPR013702 -
Tsu07g01142 536 SUPERFAMILY F-box domain 26 61 IPR036047 GO:0005515
Tsu07g01142 536 Pfam F-box domain 29 65 IPR001810 GO:0005515
Tsu07g01142 536 PANTHER SKP2-LIKE, FIST C DOMAIN, FIST DOMAIN, N-TERMINAL ISOFORM 1 25 532 - -
Tsu07g01142 536 Pfam FIST C domain 401 496 IPR019494 -
Tsu07g01142 536 SMART fbox_2 29 69 IPR001810 GO:0005515
Tsu07g01142 536 Gene3D - 24 69 - -
Tsu07g01142 536 SMART FIST_C_2 342 498 IPR019494 -
Tsu07g01142 536 PANTHER F-BOX ONLY PROTEIN 22 25 532 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01142 - - gmx:100815778 781.941