Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01129 ATGGCCGCCGCCGCCACAACCACCACTCCTTCCAGATCTCCGTTCCATTCTCCCTCTCCTTCCCATTCAACTTTCCCAAAACGAAACACAACCCTCACATTCCCTCTCTCTCCCATTTACAACAAACCCATTCACTCTCGTCCTTTCACCATCCCTACTTCATGCTCCGCCGCaccaaccaccaccaccacaacaaccaccaccacctccaccgAGCCTTACATCTCTCGTTTCTCCCCCACTGAACCCCGAAAAGGCTCCGACATTCTTGTTGAAGCCTTAGAACGTCAAGGAGTAACCAACGTCTTCGCTTACCCCGGTGGCGCTTCCATGGAGATCCATCAAGCTCTAACACGCTCCAAAACAATCCGTAACATACTTCCACGTCACGAACAAGGTGGAGTTTTCGCCGCCGAAGGTTATGCTCGTTCCTCCGGTATCCCCGGCGTTTGTATCGCCACCTCCGGTCCCGGAGCTACCAACTTAGTCAGTGGCCTCGCCGATGCTTTAATGGATAGCATCCCTCTCATCGCTATCACCGGTCAAGTTCCCCGGAGAATGATCGGAACCGATGCTTTTCAAGAAACCCCAATAGTTGAAGTAACTAGATCTATCACTAAACATAACTACCTCATTCTTGATGTTGAAGATATTCCTAGGGTTGTTAAAGAGGCTTTTTTTATTGCAAATTCGGGCCGGCCTGGCCCTGTTCTCATTGATGTACCTAAAGATGTTCAACAACAGTTAGCTGTTCCTAATTGGGCTGAGCCCATCAAGCTTACCGGGTATCTTTCTAGGTTGCCTAAGATTCCTAATGAGGTCCAATTAGAACAGGTTTTGAGGTTGTTGTTAGAGTCTAAAAAACCAGTTTTGTATGTTGGTGGTGGTTGTTTGAATTCAAGTGAGGAATTAAACCGGTTTGTTGAATTAACTGGTGTTCCGGTTGCTAGTACTTTAATGGGACTAGGTAGTTACCCTATTGGAGGGGAACATTCCCTTTCAATGTTGGGTATGCATGGTACTGTTTATGCTAATTATGCCGTTGATAATAGTGATTTGTTGCTTGCTTTTGGGGTTAGGTTTGATGATCGTGTTACTGGGAAGTTAGAAGCTTTTGCTAGTAGGGCTAAGATTGTTCATATAGATATTGATTCAGCTGAGATTGGGAAGAATAAGATTCCTCATTTGTCGATTTGTGCGGATATGAAGGTGGCATTGGAAGGTCTTAATAGGATTTTGGAGAGTAAAGGAATTAAGGGTAAACTTGATTTTGAGTCATGGAGGAATGAGTTGAATGCTCAGAAGTTGAAGTTTCCTCTTGGTTTTAAGACGTTTGAGGATGCAATTTCGCCGCAGTATGCTATTAAGGTGCTTGATGAGTTGACTAATGGTGAGGCTATTGTTAGTACTGGTGTTGGACAGCATCAAATGTGGGCTGCTCAGTTTTATAAGTATAAGAGACCTAGGCAGTGGTTAACTTCTGCTGGACTTGGTGCTATGGGTTTTGGATTGCCTGCTGCTATTGGTGCTGCTGTTGCTAACCCTGATGCGATCGTTGTTGATATTGATGGTGATGGTAGTTTTATGATGAATGTTCAAGAGTTGGCTACTATAAGAGTGGAAAATCTTCCGATTAAGATTTTATTGTTGAATAATCAACATTTGGGTATGGTTGTTCAGTGGGAGGATAGATTCTATAAGGCAAATAGAGCTCATACTTATCTTGGTGACCCTTCTAGGGAGGATGAGATTTTCCCTAACATGCTTGGATTTGCCGATGCTTGTGGAATACCGGCTGCTCGTGTGACGAAGAAGGAAGAGCTAAGAGATGCTATTCAGAAAATGTTGGACACTCCTGGTCCTTATCTCCTTGATGTCATTGTACCTCATCAAGAACATGTCTTGCCAATGATTCCAAGTAATGGATCTTTCAAGGATGTGATCACTGAAGGTGATGGCAGAACGAGTTACTGA 1974 0.4311 MAAAATTTTPSRSPFHSPSPSHSTFPKRNTTLTFPLSPIYNKPIHSRPFTIPTSCSAAPTTTTTTTTTTSTEPYISRFSPTEPRKGSDILVEALERQGVTNVFAYPGGASMEIHQALTRSKTIRNILPRHEQGGVFAAEGYARSSGIPGVCIATSGPGATNLVSGLADALMDSIPLIAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLILDVEDIPRVVKEAFFIANSGRPGPVLIDVPKDVQQQLAVPNWAEPIKLTGYLSRLPKIPNEVQLEQVLRLLLESKKPVLYVGGGCLNSSEELNRFVELTGVPVASTLMGLGSYPIGGEHSLSMLGMHGTVYANYAVDNSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKIPHLSICADMKVALEGLNRILESKGIKGKLDFESWRNELNAQKLKFPLGFKTFEDAISPQYAIKVLDELTNGEAIVSTGVGQHQMWAAQFYKYKRPRQWLTSAGLGAMGFGLPAAIGAAVANPDAIVVDIDGDGSFMMNVQELATIRVENLPIKILLLNNQHLGMVVQWEDRFYKANRAHTYLGDPSREDEIFPNMLGFADACGIPAARVTKKEELRDAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSNGSFKDVITEGDGRTSY 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01129 657 SUPERFAMILY DHS-like NAD/FAD-binding domain 272 439 IPR029035 -
Tsu07g01129 657 MobiDBLite consensus disorder prediction 1 30 - -
Tsu07g01129 657 Pfam Thiamine pyrophosphate enzyme, central domain 277 409 IPR012000 GO:0000287|GO:0030976
Tsu07g01129 657 Pfam Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 85 248 IPR012001 GO:0030976
Tsu07g01129 657 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 79 260 IPR029061 -
Tsu07g01129 657 Gene3D - 74 267 - -
Tsu07g01129 657 Gene3D - 441 627 - -
Tsu07g01129 657 CDD TPP_PYR_POX_like 88 243 - -
Tsu07g01129 657 PANTHER THIAMINE PYROPHOSPHATE ENZYMES 50 656 IPR045229 -
Tsu07g01129 657 PANTHER ACETOLACTATE SYNTHASE 50 656 - -
Tsu07g01129 657 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 448 648 IPR029061 -
Tsu07g01129 657 Gene3D - 276 440 - -
Tsu07g01129 657 TIGRFAM acolac_lg: acetolactate synthase, large subunit, biosynthetic type 85 649 IPR012846 GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660
Tsu07g01129 657 CDD TPP_AHAS 449 640 IPR039368 GO:0030976
Tsu07g01129 657 ProSitePatterns Thiamine pyrophosphate enzymes signature. 508 527 IPR000399 GO:0000287|GO:0030976
Tsu07g01129 657 Pfam Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 471 626 IPR011766 GO:0003824|GO:0030976
Tsu07g01129 657 MobiDBLite consensus disorder prediction 51 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01129 Tsu-Chr7 9643150 9645536 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01129 K01652 - gmx:100782250 1054.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01129 07 9643150 9645536 Tsu07g01129 07 9643150 9645536 ECH