Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01125 atgAGAAGGCCATTGAAACACCACAACAAGAATCAAGACCCTTTCCAACAATTACCCGATGATGTCGTTCTCCTCATTCTCACCAAGCTCAGCtctacttcttcttctcctccCCATTTCCTCAATATCCTCTTAACATGCAAAAGATTGAACCGCTTATCTCTTCATCCAATAGTACTATCCAAAGCTGGCCCCAAAGTTCTCGCCGTCAAGCCCCAAAATTGGTCTGAAACCTCTCACCGTTTCCTCAAACGCTGTGTTAACGCCGGTAACATTGATGCCTGCTACACTCTTGGAATGATCCTATTTTACTGTCTTCAAAATCGAAGGAGTGGACTATCGCTGATAGCAAAGGCGGCAATGAAGATGCACGCGCCGGCTTTATACTCACTCGCTGTGATTCAGTTCAACGGAAGCGGTGGCACTAAACAAGACAAAGATCTACGCGCTGGAGTGGCACTTTCTTTACGCGCGTCACTTTTAGGCCATATCGACGCGCTTCGGGAGTTGGGTCATTGTCTTCAAGACGGTTACGGAATCAAGCAGAACGTCACGGAGGGACGACGGTTATTGGTACAGGCTAATATGCGTGAGCTAGTATTTGTCTTACGCGCTCTTATGTTAGATTCACCTTCACGCGCCGCCAGTTCTTGTCAAGGGAGGTTGCTTTGCCTGAAAAACATGACTGTGCCGCCGTTGATAAGTGCTAATGTGTACAACATGAACTTGACCGTGCCGGATGTGCATCCGGCTAACGGGTTTTTGAGAGAGTGGTTTGAATCGGGTCGGGGCAAATTGGATGATGGGTTAAGGTTGTGTGCACATATTGGATGCGGCCGGGCAGAAACTCGGCCGCATGAGTTTCGGAGGTGTTCGGTGTGCGGTAAGGTGAATTATTGTTCGAGAGGATGTCAGTCGCTCGATTGGAAATTGCGGCATAAGACCGAGTGTTCGCCGGAATTGTGGTTTAATGAGAataatggtggtggtggtgtgaaTATGGAAAATGACATGGTCGTGGCCCATAATGCAGCTGTTTAA 1041 0.4611 MRRPLKHHNKNQDPFQQLPDDVVLLILTKLSSTSSSPPHFLNILLTCKRLNRLSLHPIVLSKAGPKVLAVKPQNWSETSHRFLKRCVNAGNIDACYTLGMILFYCLQNRRSGLSLIAKAAMKMHAPALYSLAVIQFNGSGGTKQDKDLRAGVALSLRASLLGHIDALRELGHCLQDGYGIKQNVTEGRRLLVQANMRELVFVLRALMLDSPSRAASSCQGRLLCLKNMTVPPLISANVYNMNLTVPDVHPANGFLREWFESGRGKLDDGLRLCAHIGCGRAETRPHEFRRCSVCGKVNYCSRGCQSLDWKLRHKTECSPELWFNENNGGGGVNMENDMVVAHNAAV 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01125 346 SUPERFAMILY F-box domain 8 63 IPR036047 GO:0005515
Tsu07g01125 346 Pfam MYND finger 278 317 IPR002893 -
Tsu07g01125 346 Gene3D Tetratricopeptide repeat domain 68 201 IPR011990 GO:0005515
Tsu07g01125 346 PANTHER MYND DOMAIN-CONTAINING 6 338 IPR044508 -
Tsu07g01125 346 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 6 338 - -
Tsu07g01125 346 SUPERFAMILY HIT/MYND zinc finger-like 271 319 - -
Tsu07g01125 346 Gene3D - 264 321 - -
Tsu07g01125 346 ProSiteProfiles Zinc finger MYND-type profile. 275 317 IPR002893 -
Tsu07g01125 346 SUPERFAMILY HCP-like 77 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01125 Tsu-Chr7 9607649 9609445 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01125 - - gmx:100820040 476.092