Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01061 ATGGACCCGAAGGAGAAACAAGCGATGTACCGCGATATCGGTTTACAAGTCGTAATGATCCTTGCACTAGTCTTAATCTTCCTAAGCATGCACGGAATTCCACAAAAAATTCTCGCAAAACTCCGAATCCGAAACCGAACCGGAATCAAAGCAAAGCGTCACTTCGTTCGTGGCGCACAGCTTCTAACACAAGCTAGATCTTCCAAAAACAAATCCAGATCCGCAATCAATAACCTCGCAACCGAAGCTTTAGCCGAAGCAGAAAAAGCGATCGAACTCGATCCTAAAGATGCTGCTTCTTATCTTCTCAAAGCTATGATTCTCGATCTTCAAGGTTTTCGAACTTCTGCTCTTGAATCGCTTGATGCAGCTTTATCTCCTCTCACTGCTAGTTCTCTTGCGAAAGATGAACGTGGTGATGCGTTGTATAAGAGAGCTGAGTTGAAACTCGCGACGAGTGAACGCGGACGAGTTGACTCGGCTTTAGCTGATTTGACTGAGTCGGTTATTTTGAGTCCTAAAAACGCGAAAGCTTGGTGTGCTTTGGGAGAGTGTTATGAAGGAAAGAAGATGGATGAAGAAGCGAAGAAAGCTTACAAGGAAGCTCATGAGTTGGCGCCAGAATTTTCTGTGCCGGTTGAAGCACTTAACAGCAACGGAACAAAAGATAAAGAGCAGTCTTAA 684 0.4459 MDPKEKQAMYRDIGLQVVMILALVLIFLSMHGIPQKILAKLRIRNRTGIKAKRHFVRGAQLLTQARSSKNKSRSAINNLATEALAEAEKAIELDPKDAASYLLKAMILDLQGFRTSALESLDAALSPLTASSLAKDERGDALYKRAELKLATSERGRVDSALADLTESVILSPKNAKAWCALGECYEGKKMDEEAKKAYKEAHELAPEFSVPVEALNSNGTKDKEQS 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01061 227 SUPERFAMILY TPR-like 60 209 IPR011990 GO:0005515
Tsu07g01061 227 ProSiteProfiles TPR repeat profile. 176 209 IPR019734 GO:0005515
Tsu07g01061 227 PANTHER - 10 219 - -
Tsu07g01061 227 Gene3D Tetratricopeptide repeat domain 132 222 IPR011990 GO:0005515
Tsu07g01061 227 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 10 219 - -
Tsu07g01061 227 SMART tpr_5 139 175 IPR019734 GO:0005515
Tsu07g01061 227 SMART tpr_5 176 209 IPR019734 GO:0005515
Tsu07g01061 227 Pfam Tetratricopeptide repeat 176 209 IPR001440 GO:0005515
Tsu07g01061 227 Gene3D Tetratricopeptide repeat domain 36 131 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01061 - - gmx:100799725 260.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01061 07 8865704 8868005 Tsu07g01061 07 8865704 8868005 ECH