Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01059 ATGTCCACCATTAATGAAGATTTTCAAGGTGTTTCAAATTGTTATGTGTTCAAGAGCCGATTGCAAGAGTATGCTCAGAAAGCGGGACTCCCCACACCTGTGTATGAAACTATCAAGGAAGGGCCTTCCCATGAACCTTCTTTTAAGTCCACAGTGGTTGTGAATGACGTTCGGTATGATTCTTTGGTTGGATTTTTTAACCGTAAAGCTGCAGAGCAGTCAGCTGCAGAGGTTGCTTTGATGGAGTTGGCCAAATCTGGTGCAGTCAATCAGTCCATCACTCAACCTGTTCATGAAACTGGATTGTGCAAGAATTTACTTCAGGAATATGCTCAGAAGATGAATTATGCAATGCCAACATATCAGTGCAAAAAGGATGATGCACCAGCTGGTAGAACACCATTATTTTCATGTACAGTAGACATTGGAGGGATTCTCTATATTGGgggaacaacaaaaacaaagaaggaaGCGGAGATAAAAGCCGCAAGAACTGCTTTATTAGCTATCCAGACAAATGCATCTCAGTCTTCTCAAAACCAGTTTGGCCCTTTGACTGTCATTCCATCCAGAAAAAGGCCAGCAGACCCTGTTGCTGATGAGGCTTTGAAAGCTCCGAAGCCTAAGAAATCACGCTTTAAAAGGAAATGTTCCAAGAGGAAACAGTCTAGAGATAAGAGGCGCCGTAACAATGCTGGCGATGGAGCAAATATCAATCCCGAGGTAGAATCAGTTAATGGTGAATCTGGCCTCCAGGAAATCAAATCTGAAGCAGCATTCCCTTCGGAAGCCATGAAGAATTCTGAGAATGGTGTATCAACCACAAATATCAATCCCAAGGTAGAATCAATTAATGCATTCCCTTCGGAAGCCGTGAAGAATTCTGCGAATGGTGTATCAACTGCAAATATCAATCACGGGGTAGAATCACTAGTAAGTGTTAATGGCGCATCTGGCCTCCTGGAAATCAAATCTGAAGCAGAATTTCCTTCAGAAGCCATGAAGATTTCTGAGAATGGAGTGTCAACTACAAATATCAATCTCGGGGTAGAATCACTTGCAAGTGTTATTGGCGAACCTGGCCTCCTGAAAATCAAATCTGAAGCAGCATTCCCTTCGGAAGCCATGAAGAATTCTGAGAATGGTGTATCACCTACAAATATCAACCTTGGGGTTGAATCACTTGCAAGTGTTAATGCTGAATCTGGCCTCCATGAAATCAAATCTGAAGCAGCATTGCCTTTGGATGGTATGGAGATTTCTGAGAATGGTGTATCAACTACAAATATCAATCCCGGGGTAGAATCACTAGAAAGTGTTAATGGTGAATCTCGCCTCCAGGAAATCAAATCTGAAGCAGCATTACCTTCAGAAGCCATGGAGATTTCTGAGAATGGAGTATCAATTACAAATATCAATCCTGGGGTAGTATCGCTAGCAAGTATTAATGGCGAGGAAATAAAATCTGAAGCAGCATTGCCTTTGGAAGCCATGAAGAATTCTGAGAACGGAGTATCAACTAATCATCATGAGAAAGAGACATTAGCCGGAGATGtgtcttttgttttaaataaccaaaaggtttttgaaaatgagAAGTCAGCAGAATTGCAATCCAAAGAGGACAGTCTTGGAAATGTTGTTACAGAAGTGGTGTTTGCGTCTAACGGAGACATGCCGACAATGAATGTGGAGACGAACGAACAGCGTTGTAATGGGGATATGGTCTTTGAAGAATGA 1740 0.408 MSTINEDFQGVSNCYVFKSRLQEYAQKAGLPTPVYETIKEGPSHEPSFKSTVVVNDVRYDSLVGFFNRKAAEQSAAEVALMELAKSGAVNQSITQPVHETGLCKNLLQEYAQKMNYAMPTYQCKKDDAPAGRTPLFSCTVDIGGILYIGGTTKTKKEAEIKAARTALLAIQTNASQSSQNQFGPLTVIPSRKRPADPVADEALKAPKPKKSRFKRKCSKRKQSRDKRRRNNAGDGANINPEVESVNGESGLQEIKSEAAFPSEAMKNSENGVSTTNINPKVESINAFPSEAVKNSANGVSTANINHGVESLVSVNGASGLLEIKSEAEFPSEAMKISENGVSTTNINLGVESLASVIGEPGLLKIKSEAAFPSEAMKNSENGVSPTNINLGVESLASVNAESGLHEIKSEAALPLDGMEISENGVSTTNINPGVESLESVNGESRLQEIKSEAALPSEAMEISENGVSITNINPGVVSLASINGEEIKSEAALPLEAMKNSENGVSTNHHEKETLAGDVSFVLNNQKVFENEKSAELQSKEDSLGNVVTEVVFASNGDMPTMNVETNEQRCNGDMVFEE 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01059 579 MobiDBLite consensus disorder prediction 208 226 - -
Tsu07g01059 579 MobiDBLite consensus disorder prediction 174 250 - -
Tsu07g01059 579 CDD DSRM_AtDRB-like_rpt1 16 84 IPR044450 GO:0003725
Tsu07g01059 579 PANTHER RIBONUCLEASE III 4 300 IPR011907 GO:0003723|GO:0004525|GO:0006364
Tsu07g01059 579 SUPERFAMILY dsRNA-binding domain-like 15 83 - -
Tsu07g01059 579 Gene3D - 17 98 - -
Tsu07g01059 579 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 102 172 IPR014720 -
Tsu07g01059 579 PANTHER DOUBLE-STRANDED RNA-BINDING PROTEIN 1 4 300 IPR031147 GO:0003725
Tsu07g01059 579 Pfam Double-stranded RNA binding motif 18 82 IPR014720 -
Tsu07g01059 579 Pfam Double-stranded RNA binding motif 104 168 IPR014720 -
Tsu07g01059 579 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 16 85 IPR014720 -
Tsu07g01059 579 SUPERFAMILY dsRNA-binding domain-like 104 171 - -
Tsu07g01059 579 Gene3D - 99 172 - -
Tsu07g01059 579 SMART DRBM_3 103 171 IPR014720 -
Tsu07g01059 579 SMART DRBM_3 17 84 IPR014720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01059 Tsu-Chr7 8852158 8855899 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01059 - - mtr:MTR_3g100120 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01059 07 8852158 8855899 Tsu07g01059 07 8852158 8855899 ECH