Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01041 ATGAACGAGTCTCCGCGTAAAGATCTACAAGTCTTCGATTTCAATCAACAAGATCAGATTAACACCGATAATCACCTTTTCAACAAAATCCCTAATCAAGATTTGGAAACAGGTTGTTCAAACCCCTCTTTCAAAACAATGGAAGATACAATTGATAGCAGAGTGGAGAATTCTGAGTTAGGAGATGGCAAACAATCAAACTCCATTAGTCAGGAAAATCAAtgtcattttaaaatagatgTTGATTACTATGACCAGCCAGAGAATAGGGATACAAGTGGTGGTGCATCTACACCTGAGACGAGCCAGATTGGTCCTTCAGGGTCTCCAACCAGTAAAGAATCTGTTGATGTTAGTTCTGATGCTGATGATTGCATGAACTATGAGAGTGCTCCAACAAGTGCTGATTCTGATATTGCAGAGAATGCTGTATTTCATCTTTCACTGAATGATTGTGAATTGGATGGTGCACATGCATCTGACATGGATAACATGAATACAGACATTGTTCTCCATCCTGATTATATAATTTACCAGGATAATTATTACATGGGGCCAATGTTAACCTTTTCACATCGTTGCATCAAGATCAATGTTTCAACTGCATGTATGAAGCAAGGGGCCTTTAATCTTGAATGGGGACTTGATGATCTCATTGATATTAAGTGTCAGTGGTTTCAAAATAGTGGAACGGTCATCATAAAGATTAATGCAATATCAAGGAATGCAATTCCCATAGATCATGTAAGCAACACTTCAGGCATTGAGGAATTGGAGATTGCAGTTGTTGATTCCAATTGGTCCCTGATACATAGACAGATCACTTCTCTTAATGTGAAATACTTGGCTATTTGGAACATGATGCTTAATATGGATGTAGAAGATAGCGAAACAAAATCGGGTGGATCAAGAGGCTACTTTCCTAATTTCGAGGAGTCTTTTGATGAAGTTGTCTATCCTAAAGGGGATCCAGATGCTGTTTCACTAAGCAAGAGAGACTTTGATCTACTACAACCAGACACATTCGTTAATGACACAATAATTGACTTTTACATTCAGTATCTGAAGAATCAGATACAAGAGGAGGAAAAACctagatttcatttttttaatagtttctTCTTTCGAAAGCTGGCTGATTTGGACAAAAATCCATCGAGTGCTTCGGATGGAAAAGCAGCATTTCTACGTGTTCGTAAATGGACAAGAAaagtaaatttatttgaaaaggATTACATCTTCATTCCTGTGAACTTCAATCTTCATTGGAGTTTAATAGTCATATGCCATCCTGGTGAAGTGGTTAATTTTAATGATAAAGAGTTGGGAAACTCGCTTAAGGTACCGTGTATATTGCATATGGATTCTATAAAAGGAAATCACAGTGGTCTGAAAAACCTGCTGCAAAGTTACTTGTGGGAAGAATGGAAAGAGAGACATAAAGATGCATGTGAAGATCTTTCAGCACTATTTTCAAATTTGCGTTTTCTCCCCCTTGCGTTGCCACAGCAAGAAAACTCATTTGATTGTGGCCTCTTTCTCCTGCACTACCTAGAACTCTTCCTTGCTGAAGCTCCTCTTACTTTCAATCCATTCAAAGTAACGAAGTTTTCCAATTTTCTCAATGTGGACTGGTTTCTGCCTGCTGAAGCTTATCTCAAGCGAACACTGATCCAGAAGTTGATCTCTGAACTTGTCGAAAACCACGGTTCACATGAAATCTCGTCCTCCGACTGTAGTGATGACGACCAGTACATAGAAAATAATGCGAATGGAACTGGCTTTGAGCATCCCGAAGTCAACAGGGAGTCAAAAACTTCCCTTGGTGGGAAGGGAATAGAAATGACTCTATTGTCTGGATCATCGTCTTTAGATCCTCAATCTTTTAACAACTCAGGAATGGTTCTTAAGGATCTTTTTGAGCCAGGTGCTACAGGACCAACATTGGCACAGTGCCATTCTTTTGACCAGCGATCATCTGATTATCGTTTCAACAATTCATTATTTTCAATGGAGGAAGACTCAGATCTTGGTGAACAATTTATGTATTTGGCCACAGACACCAACTTTGCACAAGTGGCTGAAATTACACCAACTTTGCCTTACCTTCCTAGGGATTGTGGAAATGGGACTCACATACCAGAAATCTCTCCGCAAGAGGCTGTGTCATCTCCAAGTAGTGCCTCAGAGGATACAGAAGATATAGGGGTCACTGGAAATTGTCCCGACAATGGGAATGAACCCATAGCCTCTAATGAGGCAGAACAAGGTGAACAAATTTGTTCGCCCATAGAAAATACTGAGCATTTTATAGATATTTCTGGTTCTGCTAGCAACAATTTGCCAATACCCTTGGTCGTGGGAGTTTCTCACGACACCATTACGAATTGTGATGGTTACAAAAATGGAGATATTCACTCTCCCTGTCAGGAAACTCCCACAATAGCATTGCCTCAGGTTTCTGATGCAGCAGATGAGGCCAGATCTGATGATGGTCAGATGATTGATGGCACAGAACCTAATATTTGTGAGGAACAAGCTGCAAAGAGGAGGAGGGTTATGCCTCAACAATCAGAAGTGATGGAATTGTGA 2592 0.3931 MNESPRKDLQVFDFNQQDQINTDNHLFNKIPNQDLETGCSNPSFKTMEDTIDSRVENSELGDGKQSNSISQENQCHFKIDVDYYDQPENRDTSGGASTPETSQIGPSGSPTSKESVDVSSDADDCMNYESAPTSADSDIAENAVFHLSLNDCELDGAHASDMDNMNTDIVLHPDYIIYQDNYYMGPMLTFSHRCIKINVSTACMKQGAFNLEWGLDDLIDIKCQWFQNSGTVIIKINAISRNAIPIDHVSNTSGIEELEIAVVDSNWSLIHRQITSLNVKYLAIWNMMLNMDVEDSETKSGGSRGYFPNFEESFDEVVYPKGDPDAVSLSKRDFDLLQPDTFVNDTIIDFYIQYLKNQIQEEEKPRFHFFNSFFFRKLADLDKNPSSASDGKAAFLRVRKWTRKVNLFEKDYIFIPVNFNLHWSLIVICHPGEVVNFNDKELGNSLKVPCILHMDSIKGNHSGLKNLLQSYLWEEWKERHKDACEDLSALFSNLRFLPLALPQQENSFDCGLFLLHYLELFLAEAPLTFNPFKVTKFSNFLNVDWFLPAEAYLKRTLIQKLISELVENHGSHEISSSDCSDDDQYIENNANGTGFEHPEVNRESKTSLGGKGIEMTLLSGSSSLDPQSFNNSGMVLKDLFEPGATGPTLAQCHSFDQRSSDYRFNNSLFSMEEDSDLGEQFMYLATDTNFAQVAEITPTLPYLPRDCGNGTHIPEISPQEAVSSPSSASEDTEDIGVTGNCPDNGNEPIASNEAEQGEQICSPIENTEHFIDISGSASNNLPIPLVVGVSHDTITNCDGYKNGDIHSPCQETPTIALPQVSDAADEARSDDGQMIDGTEPNICEEQAAKRRRVMPQQSEVMEL 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01041 863 Gene3D - 367 498 - -
Tsu07g01041 863 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 2B-RELATED 8 860 - -
Tsu07g01041 863 SUPERFAMILY Cysteine proteinases 319 565 IPR038765 -
Tsu07g01041 863 MobiDBLite consensus disorder prediction 90 116 - -
Tsu07g01041 863 MobiDBLite consensus disorder prediction 716 734 - -
Tsu07g01041 863 MobiDBLite consensus disorder prediction 85 133 - -
Tsu07g01041 863 MobiDBLite consensus disorder prediction 705 756 - -
Tsu07g01041 863 Pfam Ulp1 protease family, C-terminal catalytic domain 342 542 IPR003653 GO:0006508|GO:0008234
Tsu07g01041 863 ProSiteProfiles Ubiquitin-like protease family profile. 327 521 IPR003653 GO:0006508|GO:0008234
Tsu07g01041 863 Gene3D - 319 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01041 Tsu-Chr7 8699054 8708996 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01041 K08596 - gmx:100800444 1116.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01041 07 8699054 8708996 Tsu07g01041 07 8699054 8708996 ECH