Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01034 ATGAACATTAAATTGGCCACGGTCTTAACACTTTTTTGCTATGTAATTTTCATAAACAATATCAATGCAATTGATCCATGTGCATCTCAACCAGATGACTCTGATCTTAACGTAATTCCCATGTATGGAAAATGTTCACCATTCAACCCACCCAAAGCAGATTCATGGGACAACAGAGTCATAAACATGGCCTCCAAAGATCCAGCCCGGATGAACTACCTATCGACATTAGTAGCCCAAAAAACTGCCACTTCGGCTCCAATTGCTTCGGGCCAATCCTTCAACATCGGCAACTACGTTGTTCGGGTCAAAATTGGAACACCGGGCCAACTTCTTTTCATGGTTCTTGACACAAGTACCGACGAGGCTTTTGTCCCGTCCTCTGGCTGCATTGGTTGCTCCGCGACAACTTTCTACCCTAACGCCTCCACTAGTTTTGTCCCATTGGACTGTTCTGTTCCACAATGTGGTCAGGTTCGTGGGCTTTCGTGCCCAGCCACGGGCTCTGGAGCATGTTCATTCAACCAGTCATATGCTGGCTCGACTTTCTCGGCCACACTTGTTCAAGATTCGCTTAGATTAGCTACGGATGTTATCCCTAGCTATTCTTTTGGAAGCATTAATGCTATTGCCGGTTCTTCGGTTCCAGCCCAAGGGCTTTTGGGTTTGGGCCGTGGCCCATTATCTTTATTATCTCAATCCGGGACAACTTATTCGGGTGTGTTTTCTTATTGTCTTCCTAGTTTTAAATCTTACTATTTTTCCGGGTCACTTAAACTCGGGCCCGTGGGTCAACCCAAAAGTATTCGAACCACACCACTTCTTCGCAATCCCCACCGTCCATCTCTCTACTACGTCAATTTAACCTCAATCAGCGTAGGCCGTGTATACGTTCCTTTACCAAGCGAACTTTTAGCGTTTAACCCAACTACTGGAGCCGGAACCATAATTGATTCAGGTACGGTTATAACCCGTTTTGTGGAACCCATTTACAACGCAATTAGGGACGAATTCAGGAAACAAGTAACCGGTCCTTTCTCGAGCTTAGGAGCATTTGACACATGTTTTGTGAAAAACTACGAAACATTAGCACCAGCTATTACATTGCATTTCACAGATTTGGATCTGAAATTACCATTGGAAAATAGTTTGATTCACAGCAGCTCAGGATCTTTGGCTTGTCTTGCAATGGCAGCTGCACCAAGTAATGTGAACTCTGTGTTGAATGTGATTGCAAATTTTCAGCAACAGAATTTGAGGGTTTTGTTTGATACCGTGAATAATAAGGTTGGTATTGCACGTGAACTTTGTAACTAG 1317 0.4404 MNIKLATVLTLFCYVIFINNINAIDPCASQPDDSDLNVIPMYGKCSPFNPPKADSWDNRVINMASKDPARMNYLSTLVAQKTATSAPIASGQSFNIGNYVVRVKIGTPGQLLFMVLDTSTDEAFVPSSGCIGCSATTFYPNASTSFVPLDCSVPQCGQVRGLSCPATGSGACSFNQSYAGSTFSATLVQDSLRLATDVIPSYSFGSINAIAGSSVPAQGLLGLGRGPLSLLSQSGTTYSGVFSYCLPSFKSYYFSGSLKLGPVGQPKSIRTTPLLRNPHRPSLYYVNLTSISVGRVYVPLPSELLAFNPTTGAGTIIDSGTVITRFVEPIYNAIRDEFRKQVTGPFSSLGAFDTCFVKNYETLAPAITLHFTDLDLKLPLENSLIHSSSGSLACLAMAAAPSNVNSVLNVIANFQQQNLRVLFDTVNNKVGIARELCN 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01034 438 Gene3D Acid Proteases 75 261 IPR021109 -
Tsu07g01034 438 ProSiteProfiles Peptidase family A1 domain profile. 99 433 IPR033121 -
Tsu07g01034 438 Pfam Xylanase inhibitor C-terminal 284 433 IPR032799 -
Tsu07g01034 438 Gene3D Acid Proteases 262 438 IPR021109 -
Tsu07g01034 438 PANTHER ASPARTYL PROTEASE AED3 9 438 - -
Tsu07g01034 438 Pfam Xylanase inhibitor N-terminal 99 261 IPR032861 -
Tsu07g01034 438 SUPERFAMILY Acid proteases 92 437 IPR021109 -
Tsu07g01034 438 PANTHER ASPARTYL PROTEASE-RELATED 9 438 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01034 Tsu-Chr7 8608705 8610379 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01034 90 438 Miscellaneous Gene Families AT1G77480 26.546 1.66e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01034 - - gmx:100816307 733.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01034 07 8608705 8610379 Tsu07g01034 07 8608705 8610379 ECH