Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01031 ATGACCAACACAACTGCCGAATTGTCTCAGGGAAATAATGGTGCCCCTCCCAATAACCAACCTGGACAACCAGAGCATCAGAATTCTCGTGGCAgttccaacaacaacaattccaCCAACAATTTGATTTTCAAGAGTGGGCCACTTTTCATATCTTCCAAAGGAATTGGATGGACATCCTGGAAGAAAAGGTGGTTCATTTTAACACAAACTTCACTTGTTTTCTTCAGAAGTGATCCAAATGCCGTCCCTGTGAAGGGAAATGAAGTGAATTTGACCCTTGGCGGCATTGATCTCAACAATTCAGGCAGcGTTATTGTTAAAGCAGATAAGAAACTTTTGACTGTACAATTTCCCGATGGTCATGATGGACGCGCTTTCACACTTAAGGCTGAAACTGCAGACGACTTATACGAGTGGAAGACTGCTCTCGAGAAAGCATTGGCACAAGCACCAAGTGCTGCTAACCCGCCAGAGCAAAATGGTATCTATAGGAAAGATCAGACTGATCCAATTGATATTTCTTTGGGCCAGTTGAATGAAAAAGAACCAACCAAATCTACTGTACTTGGCCGGCCAATTTTACTTGCTTTGGAGGATGTTGATGGAACTCCGTCTTTTTTGGAGAAAGCACTGAAATTTTTGGAAGAACATGGATCCAGGGTAGAAGGTGTCTTGCGACAAGCAGCTGATGTCGATGATGTTGAACGTCGAGTTCGGGAATATGAACAAGGAAAAGTTGAGTTTGCTCCGGATGAAGATGCACATGTCATTGGTGATTGTATTAAGCATGTTCTTCGAGCATTGCCATCTTCTCCAGTACCTGCATCTTGCTGTAAGGCACTGTTAGATGCTTGCCGAACTGATCGTGCTGTTAGAGTTGCTTCTATGCGCGCTGCAATAAATGACACTTTCCCTGAACCAAACCGCCGCTTATTGCAAAGACTACTGTTGATGATGCAAAGTATTGCTTCACAGAAAGCTGTAAACAAAATGAGTTCTTCAGCCGTGGCAGCTTGCATGGCACCATTACTTCTCCGTCCCCTTCTAGCTGGAGAATGTGAGATCGATAATGATTTTGATGTAGGTGGTGATGGTTCTGTTCAACTTTTACAAGCAGCTGCAGCTGCTAACCATGCCCAAGCAATTGTTATAACTTTATTAGAAGAATATAACAGCATATTTGGGGAAGGTTCTGGATCGCCTGAATTATACACCGATTCAGAAGAAGAAAGTGGATCTGAGAGTGGGGAAGGTACTGACGATGATATGTCCTATGATGAGGATTATGACGATGAACAAGATGAATCAATACACGAGTCTGATGAAGAGGAAGATGACATTGTCAGCGGCGAATCCTACACTGAAACTGGATCTGAGGCTGATGATTATGACGACAAGGATTGTGATCATTCTCATTCAAGTTCAAGATCCTCAGATGTGAGTGAAGAAATTAAGGTCGATCAAAAGTCAATAAAGCCACGTGAAGGCTCACCGACTCGACATGAAAACACCAAAAGCAGTGAAAACGTCAGGAGTCCAAAGAAGGCTGCCAATATAGATCAGTCCAATAAGCCAGCTGATACAGTTGGAGAAGCTTCCACTGATCTAGCTGATATGCATAATACTCCTAGCCATTCACATATGAAAAAATCTGCAACCATGTCCAATGGTCCAGCACCTCGGCACCGAAACACGTTGGGGCGCACCTCTGCAAGGAAGAACCTCTCCATGGAATCCATTGATCTTCCTCTTGAAGAGGATGATGAAATTGAAAGGCTCGAAGCTGCTAGGAATGAACTGCAAACCCAAATTGCAGATGAGGTGAAGGCAAATGAAAAGCTTCAATCTAAAATAGATGAACGTAAGAAAGACATGCAAGAGCGGCGTTTGCAACTTGAGCAAGATgTGGCTAAACTGCATGAACAGCTGCACAAGGAGAAGAGTTCTCGGTCAACTCTTGAGACTAGGGCAGAACTTGAGGAATTAGCTCTGGTAGAAGTTGATCTTTCCAACTTAGAGCGGATGGTCGAGGAGCTTGGGAAGAGGCTTAATGTCAAACTTGAACATAATCAAGGATCTGCTTCAGATATCATAAAACCGTCACGTCAATCATCAAATAAGGAAAGAAAAATGAAACATAAGGGAGATGCTGATGTTGCTGCCACATCACAATCTGAAAAGTCAGTAAGCAAGGTAAATCTAGTAAGGATTTGTTCCTTAGATACTTATCTCACTGGAGGAGAAAGTGAAACTGAGAGAAAGCCAGAACCAAACAAACAGCCACCAAGTACCAAGAGATCTTCTAGTTCAAAGGGTGAGGTGGGCCGAAATCAAGCTGTAAACGAGCTACAAAACGCGGATAGAGGCCGAGAGTCGAGTCAGTCTTCACGCAACCAGGATAAAGTAAAAGGATCTGAGCGTCACCAACCACTTCCATCCCCAAAAGGTAAGCAGCTTCAAGGATCTGATGTGCCAAACGCAGAAAAGGTTAGAATCATGGACAGTTCCCAGTCACTCTCGGAGAAAAGATCAAGCAAAGGTAAATCAAATCAGAATTCtgagaaactaaaaaaatcagatAGTCAGCCAGGCTACCGCTCAGAAGGATGGGATCAACATCCAACATACTTGGAAAGAGGAAGGTCAGACGGCCATAAACAGAATTTTAATGTGGATAAAGGTCGATGA 2691 0.4277 MTNTTAELSQGNNGAPPNNQPGQPEHQNSRGSSNNNNSTNNLIFKSGPLFISSKGIGWTSWKKRWFILTQTSLVFFRSDPNAVPVKGNEVNLTLGGIDLNNSGSVIVKADKKLLTVQFPDGHDGRAFTLKAETADDLYEWKTALEKALAQAPSAANPPEQNGIYRKDQTDPIDISLGQLNEKEPTKSTVLGRPILLALEDVDGTPSFLEKALKFLEEHGSRVEGVLRQAADVDDVERRVREYEQGKVEFAPDEDAHVIGDCIKHVLRALPSSPVPASCCKALLDACRTDRAVRVASMRAAINDTFPEPNRRLLQRLLLMMQSIASQKAVNKMSSSAVAACMAPLLLRPLLAGECEIDNDFDVGGDGSVQLLQAAAAANHAQAIVITLLEEYNSIFGEGSGSPELYTDSEEESGSESGEGTDDDMSYDEDYDDEQDESIHESDEEEDDIVSGESYTETGSEADDYDDKDCDHSHSSSRSSDVSEEIKVDQKSIKPREGSPTRHENTKSSENVRSPKKAANIDQSNKPADTVGEASTDLADMHNTPSHSHMKKSATMSNGPAPRHRNTLGRTSARKNLSMESIDLPLEEDDEIERLEAARNELQTQIADEVKANEKLQSKIDERKKDMQERRLQLEQDVAKLHEQLHKEKSSRSTLETRAELEELALVEVDLSNLERMVEELGKRLNVKLEHNQGSASDIIKPSRQSSNKERKMKHKGDADVAATSQSEKSVSKVNLVRICSLDTYLTGGESETERKPEPNKQPPSTKRSSSSKGEVGRNQAVNELQNADRGRESSQSSRNQDKVKGSERHQPLPSPKGKQLQGSDVPNAEKVRIMDSSQSLSEKRSSKGKSNQNSEKLKKSDSQPGYRSEGWDQHPTYLERGRSDGHKQNFNVDKGR 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01031 896 SMART PH_update 43 151 IPR001849 -
Tsu07g01031 896 MobiDBLite consensus disorder prediction 794 811 - -
Tsu07g01031 896 ProSiteProfiles Rho GTPase-activating proteins domain profile. 196 395 IPR000198 GO:0007165
Tsu07g01031 896 MobiDBLite consensus disorder prediction 703 721 - -
Tsu07g01031 896 Gene3D - 30 150 IPR011993 -
Tsu07g01031 896 MobiDBLite consensus disorder prediction 762 793 - -
Tsu07g01031 896 MobiDBLite consensus disorder prediction 832 847 - -
Tsu07g01031 896 MobiDBLite consensus disorder prediction 408 451 - -
Tsu07g01031 896 Coils Coil 663 683 - -
Tsu07g01031 896 MobiDBLite consensus disorder prediction 873 896 - -
Tsu07g01031 896 SUPERFAMILY PH domain-like 18 149 - -
Tsu07g01031 896 PANTHER RHO GTPASE-ACTIVATING PROTEIN REN1 10 794 - -
Tsu07g01031 896 SUPERFAMILY GTPase activation domain, GAP 204 397 IPR008936 GO:0007165
Tsu07g01031 896 ProSiteProfiles PH domain profile. 42 149 IPR001849 -
Tsu07g01031 896 CDD RhoGAP 205 343 - -
Tsu07g01031 896 MobiDBLite consensus disorder prediction 511 577 - -
Tsu07g01031 896 CDD PH 45 144 - -
Tsu07g01031 896 MobiDBLite consensus disorder prediction 744 896 - -
Tsu07g01031 896 SMART RhoGAP_3 202 392 IPR000198 GO:0007165
Tsu07g01031 896 Gene3D Rho GTPase activation protein 174 396 IPR008936 GO:0007165
Tsu07g01031 896 Pfam RhoGAP domain 205 348 IPR000198 GO:0007165
Tsu07g01031 896 MobiDBLite consensus disorder prediction 848 865 - -
Tsu07g01031 896 MobiDBLite consensus disorder prediction 398 580 - -
Tsu07g01031 896 Pfam PH domain 45 148 IPR001849 -
Tsu07g01031 896 MobiDBLite consensus disorder prediction 692 732 - -
Tsu07g01031 896 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 10 794 - -
Tsu07g01031 896 MobiDBLite consensus disorder prediction 464 510 - -
Tsu07g01031 896 Coils Coil 591 643 - -
Tsu07g01031 896 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01031 Tsu-Chr7 8591054 8598808 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01031 - - gmx:100796201 1046.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01031 07 8591054 8598808 Tsu07g01031 07 8591054 8598808 ECH