Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01020 ATGGTGAATGTAAGAAGAAACATGACATTCACATCCATATACCAATTTACACATTCAATCCCACTCACTCATAATCATAACCTTAATCCCCTTATTAATTCCACCTTCTCTACTTTCCACAATCACAAACCTCTCTTTCAATTCTTCTCCGGTATTCTCAGACCTACAATTCGATCATTTTCTACCAAAATAACTGCTTCCTATAAAACCATGGCAAATTTCGATTCCAACTCCGTTACTTATCTGAAACAGCAAGAAGCTGCTGAGATTGATGAAACTCTCATGGGTCCTCTTGGCTTTAGCGTCGACCAGCTCATGGAATTGGCTGGTTTGAGCGTCGCTACATCCATATATGAGgTTTATAAACCCGGTGAGTATAGTCGTGTTCTTACTGTATGTGGTCCTGGTAACAATGGTGGCGATGGTCTGGTGGCTGCCCGACACCTGCATCACTTTGGTTATAAGCCATTTGTCTGCTACCCAAAGCGTACCCCCAAGCCACTTTATGCTGGGTTAGTTACTCAGCTTGAAGCGCTGTCAATCCCTTTCTTGTCAGTGGAAGATCTACCGTCAGATTTCTCCAACAACTTTGACATTCTAGTAGATGCCATGTTTGGATTCTCATTTCATGGTTCTCCAAGGCCTCCCTTTGATGATTTGATCCAAAGACTTGTTTCTCTACGtaataatcataatcaaattgGCCAAAAAAGACCGGTTATAGTCTCTGTAGATATTCCCTCTGGGTGGCATGTTGAAGAGGGAGATGTTGATGGCACAGGAATTAAACCTGATATGTTGATCTCTTTGACAGCACCAAAATTTTGTGCAAAGAAGTTTGGCGGCGCTCACCACTTTTTAGGAGGTAGATTTGTCCCACCTGCTATTGCTGAAAAGTATAAGCTTATACTTCCACCATATCCTGGAACTTCCATGTGTGTCAGAATTGGAAAGCCTCCTCAAATTGATATTTCAGCTCTACGAGAGAACTATATCTCTCCAGAATTTCTTGAAGACCAGGTGGAGGCAGACCCCTTTAATCAGTTTCGTAAATGGTTTGATGATGCGTTGGCTGCGGGTTTGAAGGAACCAAATGCTATGGGCTTATCAACTGTAGGGAAGGATGGAAAACCCTCATCACGGATCGTATTGCTAAAAGGCTTCGACAAGGATGGATTTGTGTGGTTTACAAACTACGAAAGTCAAAAGGGGCGTGCGTTATCTGAAAATCCACATGCGTCACTTCTTTTTTATTGGGATGGTTTAAACCGGCAGGTACGTGTGGAGGGGTATGTTCAGAAAGTTTCTGATGAGGAATCAGAGCAGTATTTCCATAGCCGTCCCAGAGGAAGTCAGATTGGAGCAATAGTCAGCAAGCAGAGTACTGTAGTGGCTGGTAGGAATGTTCTTTATGACGAGTACAAAGAGCTGGAACAAAAATATGCTGATGGAAGTGTGATCCCTAAACCTAAAATTTGGGGAGGATACCGGCTTACACCACATCTTTATGAATTTTGGCAAGGACAGAAATCTCGCTTGCATGACAGGTTGCGATATGTTCCCCATGATATCGATGGACAAAAGCTATGGAAGATTGAGCGGTTGGCTCCCTGa 1614 0.4263 MVNVRRNMTFTSIYQFTHSIPLTHNHNLNPLINSTFSTFHNHKPLFQFFSGILRPTIRSFSTKITASYKTMANFDSNSVTYLKQQEAAEIDETLMGPLGFSVDQLMELAGLSVATSIYEVYKPGEYSRVLTVCGPGNNGGDGLVAARHLHHFGYKPFVCYPKRTPKPLYAGLVTQLEALSIPFLSVEDLPSDFSNNFDILVDAMFGFSFHGSPRPPFDDLIQRLVSLRNNHNQIGQKRPVIVSVDIPSGWHVEEGDVDGTGIKPDMLISLTAPKFCAKKFGGAHHFLGGRFVPPAIAEKYKLILPPYPGTSMCVRIGKPPQIDISALRENYISPEFLEDQVEADPFNQFRKWFDDALAAGLKEPNAMGLSTVGKDGKPSSRIVLLKGFDKDGFVWFTNYESQKGRALSENPHASLLFYWDGLNRQVRVEGYVQKVSDEESEQYFHSRPRGSQIGAIVSKQSTVVAGRNVLYDEYKELEQKYADGSVIPKPKIWGGYRLTPHLYEFWQGQKSRLHDRLRYVPHDIDGQKLWKIERLAP 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01020 537 Hamap Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 330 537 IPR000659 GO:0004733|GO:0008615|GO:0010181
Tsu07g01020 537 ProSiteProfiles YjeF N-terminal domain profile. 87 304 IPR004443 -
Tsu07g01020 537 Pfam YjeF-related protein N-terminus 103 276 IPR004443 -
Tsu07g01020 537 ProSitePatterns Pyridoxamine 5'-phosphate oxidase signature. 503 516 IPR019740 GO:0016638
Tsu07g01020 537 Gene3D - 77 316 IPR036652 -
Tsu07g01020 537 TIGRFAM yjeF_nterm: YjeF family N-terminal domain 84 281 IPR004443 -
Tsu07g01020 537 Gene3D - 331 527 IPR012349 -
Tsu07g01020 537 PANTHER NAD(P)H-HYDRATE EPIMERASE 76 522 IPR032976 -
Tsu07g01020 537 Pfam Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 493 537 IPR019576 -
Tsu07g01020 537 SUPERFAMILY FMN-binding split barrel 338 537 - -
Tsu07g01020 537 TIGRFAM pdxH: pyridoxamine 5'-phosphate oxidase 320 537 IPR000659 GO:0004733|GO:0008615|GO:0010181
Tsu07g01020 537 Hamap NAD(P)H-hydrate epimerase [nnrE]. 83 319 IPR004443 -
Tsu07g01020 537 SUPERFAMILY YjeF N-terminal domain-like 81 311 IPR036652 -
Tsu07g01020 537 PANTHER NAD(P)H-HYDRATE EPIMERASE 76 522 - -
Tsu07g01020 537 Pfam Pyridoxamine 5'-phosphate oxidase 353 439 IPR011576 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01020 K23998 - gmx:100795497 913.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01020 07 8493572 8500666 Tsu07g01020 07 8493572 8500666 ECH