Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01013 ATGGATCTCCGGTGTGAATCAAGCAAAAAACGGAAAAGAGTGAACTCTGAATCAAGCACCAACCAAAGGAAGAAGAATGTTTCACTCGAAACAACTATGAATTTCCTCCATGAATCAAGCACAAAGCAAGCAAATGTTTCCCTAGCCATGGCGGAACTTCTCTTCTCTGAAAATTCCAATAAGAACAACATTGTGTTTTCTCCACTCTCGATACAAGTTATTCTCAGCATCATCGCTGCTGGCTCTGAGGGTCCCACACAGCAACAACTTCTCGACTTCCTCCGTTTTGAATCCATCGATCATCTCAACTCCTTCTCTTCTCAACTCGTTTCCGTCATCCTCAAAGACGCTGCTCCTGCTGGCGGACCTCGCCTCTCTTTTACCAATGAAAAAACCCTTTCTCTTCAATCTTCCTTCAAACAAATCGTGTCTTCTGATTATCAAGCCACTTTGGCTTCCGTTGATTTCATAACGAAGGCTATTGAAGTGACTAAAGAAGTGAATAAGTGGGttgaaaaagaaacaaatggtTTTATTAAAGAAATTCTTTCTCCAAGGTCACTAAACAACTTAAGTAGATTAATCTTTGCAAATGCACTGTACTTTAAAGGTACATGGAAGGAGAAATTTGATGTTTCGGAAACGAAACCCTATAACTTTCACCTTTTGAATGGCAAGCCAGTCAAGGTTCCCTTCATGACAAGTAAGAAGCAACAATTTATTAGAGCTTTTGATGATTTTAAAGTCCTTTGTCTTCCTTATGAGCAAGGAAAAGATAGGCGTCAATTCTCTATGTACATTTTTCTTCCAAATGGAAAAAAAGGCTTGCCAACTTTGGTTAAGAAGGTAGCTTCTAATTCCGAGTTATTAAACTGTAAGTTTCCTTTCGGAAAGGTGAAAGTAGGCGATTtcaaaattccaaaatttaaattttcatttgagTTTGAAACTCCTGATATAATGAAGAAGTTAGGAGTGGTTTTACCGTTCTCTCCTGGAGGTTTGACGAAAATTTTAGACTCTCCTACTAGTCATGAGCTTTATGTTTCTAACATATTTCACAAGTCTTTCATTGAAGTAAATGAGAAAGGAACAGAAGCTGCGGCTGCCACTGGTTGTCATATGAGAGCAAGGTGTATTTCAAAAGGACTAGACTTTGTAGCCGAccatccttttttatttttaattagagAAAATTCGACCAGAACAATTCTCTTCATGGGACAGATGCTTAATCCACTTCTTGAGTGA 1251 0.3693 MDLRCESSKKRKRVNSESSTNQRKKNVSLETTMNFLHESSTKQANVSLAMAELLFSENSNKNNIVFSPLSIQVILSIIAAGSEGPTQQQLLDFLRFESIDHLNSFSSQLVSVILKDAAPAGGPRLSFTNEKTLSLQSSFKQIVSSDYQATLASVDFITKAIEVTKEVNKWVEKETNGFIKEILSPRSLNNLSRLIFANALYFKGTWKEKFDVSETKPYNFHLLNGKPVKVPFMTSKKQQFIRAFDDFKVLCLPYEQGKDRRQFSMYIFLPNGKKGLPTLVKKVASNSELLNCKFPFGKVKVGDFKIPKFKFSFEFETPDIMKKLGVVLPFSPGGLTKILDSPTSHELYVSNIFHKSFIEVNEKGTEAAAATGCHMRARCISKGLDFVADHPFLFLIRENSTRTILFMGQMLNPLLE 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01013 416 MobiDBLite consensus disorder prediction 1 19 - -
Tsu07g01013 416 Pfam Serpin (serine protease inhibitor) 46 413 IPR023796 -
Tsu07g01013 416 ProSitePatterns Serpins signature. 386 396 IPR023795 -
Tsu07g01013 416 Gene3D Antithrombin, subunit I, domain 2 61 362 IPR042178 -
Tsu07g01013 416 MobiDBLite consensus disorder prediction 1 26 - -
Tsu07g01013 416 SMART serpin2 48 413 IPR023796 -
Tsu07g01013 416 CDD serpinP_plants 42 413 - -
Tsu07g01013 416 SUPERFAMILY Serpins 30 413 IPR036186 -
Tsu07g01013 416 PANTHER SERINE PROTEASE INHIBITOR, SERPIN 48 414 IPR000215 GO:0004867|GO:0005615
Tsu07g01013 416 Gene3D - 206 408 IPR042185 -
Tsu07g01013 416 PANTHER SERPIN-ZX-LIKE 48 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01013 Tsu-Chr7 8445941 8448281 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01013 K13963 - gmx:100775287 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01013 07 8445941 8448281 Tsu07g01013 07 8445941 8448281 ECH