Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00987 ATGGGGTCAGAACCACACCATTCCGGAAGCTTAATCCACAAAATCTACGCTCCATTATCCAACGAATTTCCCTTCGCAACACCTCTTCCTTCTCTCCGAACAAACGAACTCGAACTCGTACGAGGCGTTTTACGAATGCTACAAGGCTTTTCATCTTCGTTATTCGCTTGGGATCAAATTGAAAACCGTTTTCGTGTCAAAAATGGAGTTTATGTGACGCATTTGTCCCTAACAAGTCTTCATTCACTTCTTAATCAATTTATTCACGCTGCAACGTGTCTTCAAATTGTTGAGATTACGATTAAGAAGATTGAAATTGCAGTGCCGAGACCTCCTCCTACTTTGAAAGCTTTTGTTACTTCTGCTTCTGAGTGGCTTAAgCGGTTACGGAATGTTGCCTTGAAGGAGGAAGTGTCTACTAGCAATGTAGATGGAATATCCACTCCAACTTTGTTAGGGTTCAAAAATTCATTATCGAGTCTTTGCTCGGGTGCTGAGTTCCTATTGCGAATAGTTCATGAGGCCATCCCTGATGTATATTTTGAGTTTGGGGCATCTGTGCCTGCAGCAGACTTGGCTGTTCATGTTCTTGACTATCTTCATAAGAAGCTTGAAGAAATGTGTCTTGTACAAGGTGGCGAGGAGGAAGCTTATCTAATGGTACTTTACATGTATGTGGGAAGCTTGTTGCCATATATTGAGGGTCTTGATTCCTGGCTTTTTGATGGAATACTTGATGATCCTTCTGATGAGATGTTCTTTTTTGCTAATAAAGAAGTCTCAGTTGCTGAGGCTGAGTTCTGGGAAAAGAGTTATCTAATAAAAAAGCTACAACATGGTAAATTAGATACTGAGTTGTCTTCCACAAATTATACCGGTATGCCAGCTTCAAATAAGAAGAAGGAAATGGGCATGAGGGATTCCATCTCTTTGTCTAGTACAATTCAAGGAAAAGAGCAGAGCATTAGAGACTGTCCAGCTTGTCCTTTGTTTATTAAGGATTTAGCTAAGTCAATAGTCTCTGCAGGAAAATCTTTGCAGCTGATGCGCCATGTCCCAAATTCCTTAGCAGTATGtagcaaaagaaataattttaagtTTGAAAGAACTCAATCTTTAAACTATGGTTTGTCTCCTTCTCATAGAGTGGCTGGGCTAACGCTGTCAGAAATTTTTTCTGTATCACTAGCTGGACTTATTGGTCATGGTGACCATGTTTGTAAATACTTTTGTCAAGATGATTGGCACGAATCTGTGTCTGTTTCTCCCTTTgcatcttatttaaatttaaacgcGGAAAAAACAGACAATGAAAACTTAACTGCTTCACCACACTCGGAGAAGATTTGGTACAAGTTCTTGATTGATACATTATGTCAAAAAGGATCAGCTGCTTTGAAGCCAAGATATGAAAATAATGTCAATGGAGATTCTTCAGGGGATAAAGTTGTTAAGGAATCGTTTCTCTTGAGATCATGCTTACAAAATCCAGTTATTACCGTTTCTCGAAAAACAATTGGAAACAATGGGGATGCCTTGAAAACATTGAATATATCTCAAAAATTCTGCTTGCCTTCTTTAAATGATGAGGGTTTAAGAAAGGCTATATTTGGTGCAGAAAGTACATCATTTTCTGATAGTGAAGGAACAAACTATTCGTTTGGTTTTCAGTATGATGAATCCAAATACCTTCACTCACATGATACGAGGAAGCTATTAGAAGTGTTGTTTCCTTTTCCCACCATTTTGCCTTCAGTTCAGGATGGTCTTCCTGTGTCAGAGCTCTTGCCTTTCCAGAGAAATAGCACTCTTCCTTCAAGAGTTCTTCACTGGATGCAAAATGTTGACCTAAGAACGACTCCACTGCCTCTGGTTATTATGCAGTACTGTCTAACCACCTACATTCAGAAACAGGTAGATTATATTGGAGTGAATATGTTGTTAAAGTTGATGAATGAATGGAGGTTGATGGATGAGCTTGCAGTGCTGCGAGCTATATACTTGTTAGGTTCAGGTGATTTGCTACAACACTTTTCAACTGTAATTTTCGATAAGTTGGATAAGGGTGAAACATGggatgatgattttgaattaAACACGTTATTACAGGAGTCAATCAGAAATTCTGCTGATTGTATGCTGTTAAGTGCTCCAGATTCATTGGTAGTGTCAATAACCAAAAATATTGTTGAGAGTGATGAGGAAGCTAGCACAAGTGGTTCTGTTTTGGGTACTCCTCGTAAAAGTCATGTCAATAACTTCGGGATTAACCGCCTTGATATGCTAAAATTCACATATAAGGTACCTTGGCCTCTTGAACTCATTGCAAACACAGAGGCAATTAAGAAGTACAACCAGGTTATGCGGTTTTTGCTGAAGGTCAAGCGTGCAAAATTCGTATTAGATAAAGTGCGGAGGTGGATGTGGAAGGGTAGGGGATCTACAACAAATAACAGAAAACATCATTGGTTAGTGGAGCAGAAACTCCTCCATTTTGTGGATGCTTTTCACCAATATGTGATGGACCGGGTATATCACAGTGCATGGCGTGAACTATGTGAAGGTATGTCTGTGGCCAAATCTCTGGATGAGGTCATTGAAGCCCACGAGGCTTACATGTTGTCGATACAGCGGCAGTGCTTTGTGGTTCCTGATAAACTGGGAGCTTTGATTGCCAGCCGCGTTAATATCATCCTTGGTTTAGCTTTAGAATTCTATACCATACAACAGACATTAAAAAGTGGCGGAGCTGTTTCTGCAAAAAAGGCAAGGTGTGAGATGGAAGTCGACCGGATAGAGAAAGAGTTTGATGATTGCATTGCTTACTTACTTAGGGTCTTATCTTTCAAACTAAATGTAGGGCACCCTCATTTGGTTGATCTGGTCACCAGAATTAACTACAACTATTTCTATATGTCTGCTAATGGAAATTTAATGACCACCTCTGGACCTGGAAGTGTTACTTCGCGATTGGGGAAAGCCTCTGGTAAAATTGGTTGA 3000 0.3923 MGSEPHHSGSLIHKIYAPLSNEFPFATPLPSLRTNELELVRGVLRMLQGFSSSLFAWDQIENRFRVKNGVYVTHLSLTSLHSLLNQFIHAATCLQIVEITIKKIEIAVPRPPPTLKAFVTSASEWLKRLRNVALKEEVSTSNVDGISTPTLLGFKNSLSSLCSGAEFLLRIVHEAIPDVYFEFGASVPAADLAVHVLDYLHKKLEEMCLVQGGEEEAYLMVLYMYVGSLLPYIEGLDSWLFDGILDDPSDEMFFFANKEVSVAEAEFWEKSYLIKKLQHGKLDTELSSTNYTGMPASNKKKEMGMRDSISLSSTIQGKEQSIRDCPACPLFIKDLAKSIVSAGKSLQLMRHVPNSLAVCSKRNNFKFERTQSLNYGLSPSHRVAGLTLSEIFSVSLAGLIGHGDHVCKYFCQDDWHESVSVSPFASYLNLNAEKTDNENLTASPHSEKIWYKFLIDTLCQKGSAALKPRYENNVNGDSSGDKVVKESFLLRSCLQNPVITVSRKTIGNNGDALKTLNISQKFCLPSLNDEGLRKAIFGAESTSFSDSEGTNYSFGFQYDESKYLHSHDTRKLLEVLFPFPTILPSVQDGLPVSELLPFQRNSTLPSRVLHWMQNVDLRTTPLPLVIMQYCLTTYIQKQVDYIGVNMLLKLMNEWRLMDELAVLRAIYLLGSGDLLQHFSTVIFDKLDKGETWDDDFELNTLLQESIRNSADCMLLSAPDSLVVSITKNIVESDEEASTSGSVLGTPRKSHVNNFGINRLDMLKFTYKVPWPLELIANTEAIKKYNQVMRFLLKVKRAKFVLDKVRRWMWKGRGSTTNNRKHHWLVEQKLLHFVDAFHQYVMDRVYHSAWRELCEGMSVAKSLDEVIEAHEAYMLSIQRQCFVVPDKLGALIASRVNIILGLALEFYTIQQTLKSGGAVSAKKARCEMEVDRIEKEFDDCIAYLLRVLSFKLNVGHPHLVDLVTRINYNYFYMSANGNLMTTSGPGSVTSRLGKASGKIG 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00987 999 Pfam Gamma tubulin complex component C-terminal 656 971 IPR040457 GO:0043015
Tsu07g00987 999 Pfam Gamma tubulin complex component N-terminal 40 397 IPR041470 -
Tsu07g00987 999 Gene3D - 656 970 IPR042241 -
Tsu07g00987 999 PANTHER GAMMA-TUBULIN COMPLEX COMPONENT 5 992 - -
Tsu07g00987 999 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 5 992 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00987 30 703 Glycosyltransferase AT1G20570 49.135 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00987 K16572 - gmx:100782299 1533.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00987 07 8116877 8125182 Tsu07g00987 07 8116877 8125182 ECH