Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00978 atGAACAAGACCGTGAGGACAAGGTTGAATCCTAGGAAAGGTTCAATGTCacatgaaaatataattaaatttgctATAAAGTCAGAACTCATTAAAggTTCTTCTTCTCCTTACAACTCACAAGCCATGGCTTCAGTTTCAACAAACAAAGATATCAGAATCCCTCAAAACTTGCAAAAAGGCATAGGAAATGCAGTTAAAGGTGGAAAAATTTCCAGCAAAGAGAGAAAATTGGCTTTGCAACAAGATgTGGATAGATTGAAGAATAAGCTTAGGCATGAAGAGAACATTCACAAAGCATTGGATAGAGCTTTGAATAGGCCTTTGGGAGCTCTTCCTCGTCTTCCTCCTTATCTCCCTCCCTATacACTTGGACTTGTGGCTGAAGTGGCAGTACTTGAAGAAGAAATAAGAAGGCTTGAAGAGAAGGTTTTATATTTTAGGCAGAATTTGCAACAAGAAGCAGTTTACATGTCATCCTCCAAGATGAAAATGGAGCATTCAGAAGCAACAATTGTGAACAATGCAAATCTAAATGATAGTACAAAATTGAGCAatgttgtagcatctgcaaCTAGGCCTAGAACATCATTTTCTGAGGATAGACAAGGAAAAGAGATTCAATCATATACTCATTCTTACAAGATCAACAAACAATCCATAAGGAAAGGCCAAATGGCAAAAATTCCAATTGACAATAAATCACTACTGAAACGTGAATCTCCGAAAAAACAGCATCAGGAACTTCGATACCATCGTCTACAAGAAATTCCACAAGTAGATGAAAGTCCAAATACAATCTCCGAAAATATTGTCAAGTGTTTAACTAGCATTCTCTTGAGAATGAGTACATCACCTTTAAGGCCtctaaaatctaaaaattgTATCGAAGGAACCGAGTTTTTGGATCCATATGGTATCTTGGAATTTGGAAAGAGAGACATTGGTCCATACAAACAATTAAGTGCAAGTATTGAAGCTCAATCTTTCAATCCAACACAAACTGCTAAGTCTTTATTTTTACTGCATCGGTTGAAGGTTCTTTTGAGAAAACTAGCATGTGTCAACATTGAGAATCTCAACCATCAAGAAAAGCTTGCATTCTGGATCAACATATATAACTCTTGTATGATGAATGCTTTCATAGAAAATGGGATACCAAAGAGTACTGAAATGGTTGTTGCATTAATGCAGAAGGCAACAATAAATGTAGGTGGACAATTGTTAAATGCTACAACCATAGAACACTGCATTTTAAGGCTTCCATATCACTGGAAATATTTAAATTCCAAACAGATCACATTATTAAAGGAAGTAAAAAATCATGAAATGACAGTAAGAAGCATTTATGGACTTGAATTGTCAGAACCTCTTGTGACATTTGCTCTCTCTAGTGGAACTTGGTCTTCTCCTTCTGTTAGAGTTTACACAGCATCCAATGTTGAGAAAGAACTTGAAGTAGCAAAAAGAGAATACTTACAAGCTGCAGTTGGAATTTCAACATCAAAGTTTTTTATTCCAAAGATGTTAGATTGGTATTTACTTGACTTAGCAAAAGACTTAGAATCATTGATGGATTGGATATGCCTTCAATTACCAAATGAACAAATGAAAGAAACAATTAAATTTcttgagaaaagaaaaactcaacCCCTCTCACAATTTGTAAAAATTATGCCTTATGAGTTCAGATTTAGATACTTGCTATAA 1710 0.3363 MNKTVRTRLNPRKGSMSHENIIKFAIKSELIKGSSSPYNSQAMASVSTNKDIRIPQNLQKGIGNAVKGGKISSKERKLALQQDVDRLKNKLRHEENIHKALDRALNRPLGALPRLPPYLPPYTLGLVAEVAVLEEEIRRLEEKVLYFRQNLQQEAVYMSSSKMKMEHSEATIVNNANLNDSTKLSNVVASATRPRTSFSEDRQGKEIQSYTHSYKINKQSIRKGQMAKIPIDNKSLLKRESPKKQHQELRYHRLQEIPQVDESPNTISENIVKCLTSILLRMSTSPLRPLKSKNCIEGTEFLDPYGILEFGKRDIGPYKQLSASIEAQSFNPTQTAKSLFLLHRLKVLLRKLACVNIENLNHQEKLAFWINIYNSCMMNAFIENGIPKSTEMVVALMQKATINVGGQLLNATTIEHCILRLPYHWKYLNSKQITLLKEVKNHEMTVRSIYGLELSEPLVTFALSSGTWSSPSVRVYTASNVEKELEVAKREYLQAAVGISTSKFFIPKMLDWYLLDLAKDLESLMDWICLQLPNEQMKETIKFLEKRKTQPLSQFVKIMPYEFRFRYLL 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00978 569 Pfam Protein of unknown function, DUF547 358 493 IPR006869 -
Tsu07g00978 569 Coils Coil 123 150 - -
Tsu07g00978 569 PANTHER TRANSCRIPTION FACTOR 22 569 - -
Tsu07g00978 569 PANTHER EXPRESSED PROTEIN 22 569 - -
Tsu07g00978 569 Pfam Leucine-zipper of ternary complex factor MIP1 73 154 IPR025757 -
Tsu07g00978 569 Coils Coil 70 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00978 Tsu-Chr7 8050912 8054840 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00978 - - gmx:100807554 651.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00978 07 8050912 8054840 Tsu07g00978 07 8050912 8054840 ECH