Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00975 ATGTTGAGAACACAATCATCAATTCTACAAATTCCGCCTCCAACCTATGGTAACTTGGTGACTATTTTAAGCATAGATGGTGGCGGTATTAGGGGCATTATTCCCGCAACTATTCTCGAGTTCCTTGAATCGCAACTTCAAGAATTGGACGGTGAATCTGCAAGGCTTGCATATTACTTTGATGTGATTACAGGAACAAGTACGGGTGGTCTTGTAACTGCCATGTTAACTGCTCCAAATGATAAACAATGTCCTCTTTTTGCTGCCAAGGATATCAAACCATTTTACTTGGAACACTGTCCAAAGATTTTTCCACAATACAACTTGGGATCGGTGGGTAAATTGTTCAGATCATTAGCAGGACCAAAATACAATGGAAAATACCTTCACAGTGTGGTGAGGGAGATTCTTGGAGAAATTAGGGTGCATGAGACACTCACAAATATTGTGATCCCTACGTTTGACATAAAGACATTGCGACCAGTCATTTTCTCTTCTTATCAAATCAAGAGAACACCCTGCTTGGATGCTCGACTCTCTGACATATGCATCAGTACCTCTGCCGCTCCTACTTATCTTCCTAGTTATAACTTCAAGAACCAAGATACTAAAGGGAACATATATGCATTCAACCTTATTGATGGTGGTGTTTGTGCAAATAATCCGACTTTAGTAGCCGTGAATGAAGTAACCAAAGAGATAATAAATCAGAATAATGATTTTTATGCCATCAAGCCCATGGAATATAGTCGCTTTCTCATAATCTCATTGGGCACCGGAACACCGAAGAATGAGCaaaagtttgattcaaaaatgGCAGCAAAATGGAGTATGTTGGATTGGTTAACCCATGACGGATCTACTCccttaattgatatttttagtcaatCCTCCGGAGATATGGTTGATTTCCATCTTGCTACTGTCACTCAAGCACTTAACTGTCGAGATAATTACCTTCGAATACAGGATGATACATTGACCGGTATAGACTCTTCGGTTGATATTGCCACAAAAaagaatttagataaattgtGCCAAATTGGAGAAAGGTTATTGAAGAAACCCGTTTCTATGGTCAATTTAGAAACAGGTGTACTTGACCCTATTGGAAATGGGGAGACCAACCAAGAAGCTCTCAAAAGGTATTATTTATAG 1158 0.3808 MLRTQSSILQIPPPTYGNLVTILSIDGGGIRGIIPATILEFLESQLQELDGESARLAYYFDVITGTSTGGLVTAMLTAPNDKQCPLFAAKDIKPFYLEHCPKIFPQYNLGSVGKLFRSLAGPKYNGKYLHSVVREILGEIRVHETLTNIVIPTFDIKTLRPVIFSSYQIKRTPCLDARLSDICISTSAAPTYLPSYNFKNQDTKGNIYAFNLIDGGVCANNPTLVAVNEVTKEIINQNNDFYAIKPMEYSRFLIISLGTGTPKNEQKFDSKMAAKWSMLDWLTHDGSTPLIDIFSQSSGDMVDFHLATVTQALNCRDNYLRIQDDTLTGIDSSVDIATKKNLDKLCQIGERLLKKPVSMVNLETGVLDPIGNGETNQEALKRYYL 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00975 385 SUPERFAMILY FabD/lysophospholipase-like 18 365 IPR016035 -
Tsu07g00975 385 PANTHER PATATIN 1 383 - -
Tsu07g00975 385 CDD Pat17_isozyme_like 17 365 - -
Tsu07g00975 385 Pfam Patatin-like phospholipase 23 226 IPR002641 GO:0006629
Tsu07g00975 385 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 23 227 IPR002641 GO:0006629
Tsu07g00975 385 PANTHER XYLOSE ISOMERASE 1 383 - -
Tsu07g00975 385 Gene3D Cytosolic phospholipase A2 catalytic domain 13 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00975 Tsu-Chr7 8014125 8016469 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00975 13 365 Miscellaneous Gene Families AT2G26560 64.789 8.09e-170 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00975 - - gmx:100783909 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00975 07 8014125 8016469 Tsu07g00975 07 8014125 8016469 ECH