Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00973 ATGGAGAGAACACAATCATCACTTCTACAAATTCAGCCTCCTACTTATGGTAACTTGGTCACTATTCTAAGCATTGATGGTGGCGGTATTAGGGGCATTATTCCCGCAACTATCCTTGAGTTCCTTGAATCGCAACTTCAAGAATTGGACGGTGAATCTGCAAGGCTTGCTGATTACTTTGATGTCATTACAGGAACAAGTACAGGTGGACTTGTAACTGCAATGATAAGCGCTCCGAATGATAAACAACGTCCTCTTTTTGCTGCCAAGGATATCAAACCTTTTTACCTTGAACATTGTCCAAAGATTTTCCCACAACACAAGCACTTAGGAGCGATCGGGAAATTGTTCAAATCATTAGCAGGACCGAAATATGATGGAAAATACCTTCACAGTGTGGTGAGGGAGAAGTTAGGGGAAATTCGTGTGCACGAGACGCTGACTAATATTGTGATTCCAACATTTGACATAAAAACAATGCAGCCGATTATTTTCTCATCTTATAAGATCAAGAAAACACCATGCATGGATGCTCAACTCTCTGATATATGCATCAGCACCTCTGCTGCACCTACTTATCTTCCTGGCTACAATTTCAAGAACCAAGATACAGAAGGCAACACACATGAATTCAACCTTGTTGATGGCGGAGTTTGTGCAAATAATCCGACTTTAGTGGCTGTGAATGAAGTAACAAAGCAGATAATTAATCAGAATAATGACTTTTATGCCATCAAGCCTATGGAATATAGTCGTTTCTTGATAATCTCACTAGGAACCGGAACACCAAAGAATGAACAAAAGTTTACCGCAAAAATGGCATCAAAATGGGGTCTATTGGATTGGTTAACTCATGGTGGTTCAACTCCCTTAATTGATGTGTTTAGTCAATCATCAGGAGATATGGTTGATCTTCATCTTGCAACCATCACTCAAGCACTTAATTCACAACATAATTACCTTAGGATAcagGACGATACATTGATCGGTACAAATTCTTCTGTTGATATTGCCACGGAAGATAATTTAGAAAAACTTTGCCAAATTGGAGACAAGTTGTTGAAGAAACCAGTATCTAAGGTCAATCTAGAGACTGGTGTGGTTGAACCAATTGATAAAGGAGAAACCAATGAAGATGCTCTCAAAAGGTTTGCTAAAATACTTTCACAAGAAAGGAGGCTCAGAGAATTGAAGTCCCCTCACACCAACAAAGCCTTATTATAG 1224 0.3913 MERTQSSLLQIQPPTYGNLVTILSIDGGGIRGIIPATILEFLESQLQELDGESARLADYFDVITGTSTGGLVTAMISAPNDKQRPLFAAKDIKPFYLEHCPKIFPQHKHLGAIGKLFKSLAGPKYDGKYLHSVVREKLGEIRVHETLTNIVIPTFDIKTMQPIIFSSYKIKKTPCMDAQLSDICISTSAAPTYLPGYNFKNQDTEGNTHEFNLVDGGVCANNPTLVAVNEVTKQIINQNNDFYAIKPMEYSRFLIISLGTGTPKNEQKFTAKMASKWGLLDWLTHGGSTPLIDVFSQSSGDMVDLHLATITQALNSQHNYLRIQDDTLIGTNSSVDIATEDNLEKLCQIGDKLLKKPVSKVNLETGVVEPIDKGETNEDALKRFAKILSQERRLRELKSPHTNKALL 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00973 407 CDD Pat17_isozyme_like 17 366 - -
Tsu07g00973 407 Pfam Patatin-like phospholipase 23 227 IPR002641 GO:0006629
Tsu07g00973 407 Gene3D Cytosolic phospholipase A2 catalytic domain 10 400 - -
Tsu07g00973 407 PANTHER PATATIN 1 404 - -
Tsu07g00973 407 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 23 228 IPR002641 GO:0006629
Tsu07g00973 407 PANTHER XYLOSE ISOMERASE 1 404 - -
Tsu07g00973 407 SUPERFAMILY FabD/lysophospholipase-like 18 367 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00973 Tsu-Chr7 7999715 8001355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00973 11 402 Miscellaneous Gene Families AT2G26560 63.359 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00973 - - gmx:100783909 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00973 07 7999715 8001355 Tsu07g00973 07 7999715 8001355 ECH