Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00955 atgGGTGGCGCTCACAGTCGCGACGGATTTCTCGACAGTTCCGACGAAGAAAATGAAAACGAAGAAACAAATTACGAAGATGCAAGCGAAGGAAATTCAGCGGAAAGAATCAAAACTCCTTCAtcaattgatgatgttgatgctaAACTCAAAGCCCTCAAGCTCAAATACTCCACCAAAAATCATAACCCTCAAAACCCTAACGCTGTTAAGCTTTATCTTCATATCGGTGGTAACACTCCTAATGCCAAATGGGTCATTTCTGAGAAATTGACATCTTATTCTTTTGTCAAAACTCGCCGTGTTGATGGAGATAGCGGCGATGATGAAGACGATGAGGAGGAGGATGAGGATGAAGGTTTTTGGGTTTTGAAAATTGGGACTAAAATTAGGTCAAAAGTTGGGGCTGATATGCAATTGAAAACCCTAGCAGATCAGCGTCGTGTTGATTTTGTTGCGAAGGGTGTTTGGGCGTTGAAGTTTTTTACGGAGCAGCATTACAATGCTTTTTTGGTGCAGTTTCAGAATTGTACTTTTGAGAATACACATGGATATGAAGCTACTGATGAGAACAAGCTTAAGGTTTATGGAAAGGATTTTCTTGGGTGGGCGAAACCGGAAGTGGCTGATGATTCCATGTGGGAGGATGCTGATGATAGCTTTTCCAAGAGTCCTGCCTCTGCTACGCCGGTTCGAGCAAGTCAGGATTTGAAGGAGGAATTTGAGGAAGCTGCAAATGGTGGAATTCAGAGCTTGGCGCTTGGTGCTTTAGATAACAGTTTCTTGGTTGGTGAAAATGGGATTCAGGTAGTTAAGAATTTTGCACATGGGATTCATGGAAAAGGTGCTTTTGTTAATTTTGGTGGTGGTTCATCGTTGTCGGCTTCAAATTTGGCGCATTCCACTCCCAAGAAAACACTTCTCATGAAGGCTGAAACTAGCATGCTTTTGATGAGTCCGTTGGGTGAAAGTAAGCTTCATTCAACAGGTCTTCACCAGTTTGACATTGAGACAGGGAAGGTTGTGACAGAATGGAGATTTGGTAAGGATGGTACTGAGATTACAATGAAAGATATCACTAATGATAGTAAAGGTTCTCAATTGGATCCATCGGGTTCGACTTTTCTTGGGTTGGATGATAACAGGCTTTGTAGGTGGGATATGCGTGACCGTCATGGAATAGTTCAGGATCTTGCTGATTCTAGAAGTGACATGAGTACACCTGTGTTGAATTGGGCACAGGGTCATCAGTTCTCGAGGGGGACAAACTTTCAATGCTTTGCTACAACTGGTGATGGTTCTGTTGTTGTTGGTTCTTTGGATGGAAAGATTCGGCTCTATTCGATTAACTCTATGAGGCAGGCGAAAACCGCTTTTCCTGGACTTGGTTCGCCGGTTACTCATGTCGATGTAACTTTTGATGGAAAGTGGATTGTGGGAACCACTGATACTTACTTGATTGTTATCTGTACTGTCTTTACTGATAAAGATGGAAAAACTAAGAATGGTTTTGCTGGAAGAATGGGAAATAGGATTGCTGCTCCAAGGTTGCTCAAGCTCAACCCTCTCGATTCACATCTAGCTGGAGTCAATAACAAATTCCATAATGCTCAGTTTTCGTGGGTGACAGAAAATGGGAGGCAGGAGCGGCATATTGTAGCTACAGTGGGGAAATTCAGTGTGATATGGAATTTTCAACAAGTCAAGGATGGTTCTCATGAGTGCTACCAAAGCCAACAGGGTCTAAAGAGCTGCTACTGCTACAAGATAGTCCTCAGGGACGACTCCATTGTTGAGAGCCGATTCATGCACGACAAGTTTGCAGTCACTGATTCTCCTGAGGCACCATTGGTTATAGCTACCCCAATGAAAGTTAGCTCATTCAGCATATCCAACAGGCGATGA 1905 0.4273 MGGAHSRDGFLDSSDEENENEETNYEDASEGNSAERIKTPSSIDDVDAKLKALKLKYSTKNHNPQNPNAVKLYLHIGGNTPNAKWVISEKLTSYSFVKTRRVDGDSGDDEDDEEEDEDEGFWVLKIGTKIRSKVGADMQLKTLADQRRVDFVAKGVWALKFFTEQHYNAFLVQFQNCTFENTHGYEATDENKLKVYGKDFLGWAKPEVADDSMWEDADDSFSKSPASATPVRASQDLKEEFEEAANGGIQSLALGALDNSFLVGENGIQVVKNFAHGIHGKGAFVNFGGGSSLSASNLAHSTPKKTLLMKAETSMLLMSPLGESKLHSTGLHQFDIETGKVVTEWRFGKDGTEITMKDITNDSKGSQLDPSGSTFLGLDDNRLCRWDMRDRHGIVQDLADSRSDMSTPVLNWAQGHQFSRGTNFQCFATTGDGSVVVGSLDGKIRLYSINSMRQAKTAFPGLGSPVTHVDVTFDGKWIVGTTDTYLIVICTVFTDKDGKTKNGFAGRMGNRIAAPRLLKLNPLDSHLAGVNNKFHNAQFSWVTENGRQERHIVATVGKFSVIWNFQQVKDGSHECYQSQQGLKSCYCYKIVLRDDSIVESRFMHDKFAVTDSPEAPLVIATPMKVSSFSISNRR 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00955 634 Coils Coil 11 31 - -
Tsu07g00955 634 Pfam VID27 C-terminal WD40-like domain 257 578 IPR013863 -
Tsu07g00955 634 Gene3D - 310 581 IPR015943 GO:0005515
Tsu07g00955 634 MobiDBLite consensus disorder prediction 1 43 - -
Tsu07g00955 634 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 27 1 634 IPR040458 -
Tsu07g00955 634 PANTHER DEM PROTEIN 1 634 - -
Tsu07g00955 634 MobiDBLite consensus disorder prediction 14 28 - -
Tsu07g00955 634 SUPERFAMILY Putative isomerase YbhE 327 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00955 Tsu-Chr7 7865562 7868738 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00955 45 634 Acyl Lipid Metabolism Gene Families AT3G19240 66.218 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00955 - - zju:107419970 971.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00955 07 7865562 7868738 Tsu07g00955 07 7865562 7868738 ECH