Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00906 ATGTCTTcacaaatgaagaaaaaaacatcAACTCACCACAACACTCCCAAAACTCCTTACAACACCAGTCATGAATATGATACAACAGAAACCGACCACTCTCCACATAGTCAACTTTGTAACAGTCCATGTTGTTTCTTCTGCAtcataaaagaacaaaatccATCTCACAGAAGATCAAAAATATCAACATGCTTCAAACAAATGCCTCAAAGAGACAATCAAGAACATGTCTTAGTCCTTAGTGGACTATGGAACATAGCAATGACTCAACCTAACAATCCAGAATTTCCTTCTCTTGGCATATTCAACTGCATGGCAAATCTAATAACTAAAggtacaaaaaacaaaacttggcTTCACACAAATCAAAACATATACATACCTTATTATGCTGCTCATATTATTGGCTCTTATACAATGAACAAAGAAGATTTTGCACAAATAGCTGTTAAATCAGGTGTTATACCACCATTGTTAGAGCTTCTGAGAGGTAAAATAAGTTGGGTTGAACAAAGAGTTGCTGTTAGAGCACTTGGTCATTTAGCTAGTTACAATAGTACTTATGAATCAGTGGCAGAGTTTGAAAATGAGTTGGTGAAATTAACAATGAATTTAGCTTCAACttgtttagaaaaaatctaTGTTGAATTTATATCAGTTAATAGAAGAGTTGAATATCATAGAAACTTGCTTACAAGAGGTTTAGGTGatttggagatggagaatcGAAAAGCCGAAGAATGGACTAGTCAACTTCAATGTTGGTCTATTTATCTTCTTAATTGTTTTGCTTGTAAAGATTATAATAAATCTTTGAATTTAATTTGcaaaaaagtgtttttgaatgatttgtgtgATATGTGGGGTGGATTGATGAATCACACTTCACCAGGTGGGTTTGGACTCATTAGAATCCTTTGTTACAATAAcattggaaggaaaaaaattgcTAAGTTGCCAAAAGTTGTGAAAACTCTTTGTAACCTTTCAAGATCTTGTGATGATTGGCAATATCTTGGTATAGATTGTCTTTTATTGCTTCTCAAGGATCAAAATACAAGGTACAATGTTATTTTTgataatgttgatgttgtttcATGTCTTGTTGATTTGATTGAACTTAGAAGCCTTGGAGATAAATCAAATGTTGGTGACACCATCACAAAGGTGCTAGTGTCACTTCTTGAAGATATTAACAATGATTGTAAGTTGAAATTCTCGACGAATCTTATTTCGTTGAATTTTAAGTTGGTTAGGAGGAATAAGGAGAAACTGATGTCagaggtaaaattggaagaaaaaatgtttaCTGCAAAATTGATTAAGCAAGAAGCGAATCATTTGTTTAGTTTGGGAAGAGTAGAAGAAGCTTTATTGAAATATTGTGAAGCACTTGATATTTGTCCATTGAAGTTTAGAAATGAAAGAATGGCGATTTATAGTAACAAAGCTCAGTGTAatcttttgcttaaaaaagCTGATTTAGCTATTAGTGATTCTACACGTGCTCTTTGTCTCTCTAATCCAACAAATTCACATGGAAAAAGTCTTTGGAGAAGATCACAAGCTTATGATATGAAAGGAATGGCAAAAGAGAGTCTTATGGATTGTATAATGTTTATGAATGGTTTTGTTAAGTCAAATGAGAATAAGAATGTTAAGGTTCCATATCATGTTGCTAGAATGTTCTGCAAACAAATGGATGCCACGTGGCTATTTGGTACTGCTTGTTCAAAGTCAAAGGTGATACACAACGTTAATGTTCCACTTGTGGAAAACACTTGTGAGATTGAAGGGGATAATAAGATTGAAAATGAGGGTAACTATGAAGACCAACCTTGTGATCAAAAGACAAGTTTCATGCCAGGTAATTATTTATGTCATGGCCCTACATGCTTGTCTACCATTATTGAAGAACCTTTTCACGTTAAAGAAGCTAGTAGAAGAAAGATGGAAAGAGCAAGAAGGAGATTAAAGAAAGCTGTTGTAGATTAA 1998 0.3053 MSSQMKKKTSTHHNTPKTPYNTSHEYDTTETDHSPHSQLCNSPCCFFCIIKEQNPSHRRSKISTCFKQMPQRDNQEHVLVLSGLWNIAMTQPNNPEFPSLGIFNCMANLITKGTKNKTWLHTNQNIYIPYYAAHIIGSYTMNKEDFAQIAVKSGVIPPLLELLRGKISWVEQRVAVRALGHLASYNSTYESVAEFENELVKLTMNLASTCLEKIYVEFISVNRRVEYHRNLLTRGLGDLEMENRKAEEWTSQLQCWSIYLLNCFACKDYNKSLNLICKKVFLNDLCDMWGGLMNHTSPGGFGLIRILCYNNIGRKKIAKLPKVVKTLCNLSRSCDDWQYLGIDCLLLLLKDQNTRYNVIFDNVDVVSCLVDLIELRSLGDKSNVGDTITKVLVSLLEDINNDCKLKFSTNLISLNFKLVRRNKEKLMSEVKLEEKMFTAKLIKQEANHLFSLGRVEEALLKYCEALDICPLKFRNERMAIYSNKAQCNLLLKKADLAISDSTRALCLSNPTNSHGKSLWRRSQAYDMKGMAKESLMDCIMFMNGFVKSNENKNVKVPYHVARMFCKQMDATWLFGTACSKSKVIHNVNVPLVENTCEIEGDNKIENEGNYEDQPCDQKTSFMPGNYLCHGPTCLSTIIEEPFHVKEASRRKMERARRRLKKAVVD 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00906 665 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 22 657 - -
Tsu07g00906 665 MobiDBLite consensus disorder prediction 1 25 - -
Tsu07g00906 665 MobiDBLite consensus disorder prediction 1 32 - -
Tsu07g00906 665 SUPERFAMILY TPR-like 433 539 IPR011990 GO:0005515
Tsu07g00906 665 Coils Coil 645 665 - -
Tsu07g00906 665 SUPERFAMILY ARM repeat 123 377 IPR016024 -
Tsu07g00906 665 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 22 657 - -
Tsu07g00906 665 SMART arm_5 143 184 IPR000225 GO:0005515
Tsu07g00906 665 Gene3D Tetratricopeptide repeat domain 428 550 IPR011990 GO:0005515
Tsu07g00906 665 Gene3D - 51 424 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00906 Tsu-Chr7 7387187 7389677 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00906 - - gmx:100777591 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00906 07 7387187 7389677 Tsu07g00906 07 7387187 7389677 ECH