Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00898 ATGGACCCATCTATAGTGAAGCTTCTTGAAGATGATGAGGATGAAACTATGCATTCCGGGGCAGATGTGGAAGCGTTCCAAGCTGCATTGAATAGAGACATAGGCGGAGATGCTTCTAATTCTCAGCTTTCTGATTCAGATGCAGGAAGCAATAATTCATTCAGTCAATCATTATCAACTTGGCCAATTTCTAGCCATGACAACCAGATTGACTGTCAAAATCAGGAGCCTAAAATTGCACAGCAGCAAGAGCAACCTTCATCTGAAATGGTGCTGAAGCAAGAAGGACCTATCGTAGAACAGATACAGAATGTTGCCTCACAAGATGCAAGTAATCTTACTTTATCACACAAAAAATCTCAAGATGAATGTCTCCAACGCCAGACTGTACCTGTTTCCCACCAACATTCTCAAACAAATGAAGTTCTGAAATCTGAAAAAGATCCTGTCTTCAACCATGAGgcaatcaaaacaaataatccCAACTGTGAATCTCAGTATGCAAAGCTGCAGCAGATGAGTAATCAACAGGCCACGGTCAATGAACAACCTAGTAGCCAAGTCAATCGTAGTAAACAAGTACCATTTGGCTTGTTGCTCCCTATTTTGATTCCCCAACTTGCCAAAGACCGAGCCATGCAACTTCAAACTTTATTTAACAAATTGAAGAGAGATGAAATACCTAAAGATAATTTTGTACGGCTTATGAAAGGGATTGTGGGGGATCAGATGCTTAGAATAGCATTATCAAAAGTGCAACAACAGGTTGGTAGAGTAGATGGTTTATGCCGTCTTACATATGTTTTTTCTAAGATGGTTGAATATCAATTTCAACGTTATGCTAAGAACCATCCTTTTTTCTTGCAGACAAAAGCCAACACTAGTCCTTCTGCACAGCAGCACCCTGTAAGGATGCCAAGTGTTACTTCCAGCGGAACAAAATTTAACGATCCCCATGCATTAGCACAACTGCATCAGAGAAGTATGGGTGCTGCTCCAGACCATTCTCATAATACTTCTTCGGCTATCCAAGTGAAGAGTGAGCCTACCTATTCAACTATGGACATTAATGCTAAAAAATCTCAGGATCATGATGTTCGAGTAGTGCAACCAAATCAATTACCACCATCCAGTTCTAATGCCGTTAGTCAAGAAACTGAAAGATCCTCTGTTCACATACAGGGCCTTAATAAGCAACAACAACAGCATATACATTTCCCATCGACATATGGAAGCAGTGGTGGTAACTATAACCCTTTTTCCGGAACAACCACTGGTTCATCACCATCTCTCAGACCACAACCTCATCCTCATGATTCGCACATGAGGCAAATTCCACATCAGAACATTGGTCTAAGTCACTTAGGTGTAGAACGGCAGAGTTCTTTCAATGATCCTAAGAGAATGCCAGGTGGATCTGTGTCGGCTGTGGTAAACAATACAGCATCACAACAAAATCCAAATTCTTGGCAACCATCGGCAGAACAAAATTCGGGCTTGTTTACATCTATGTCATATGTAAAAAAGGAACCTAATGACCTTTCTATTGAGCAGCAACATAGGCATCATCTGTCTAAATTGCACGGGTCGCCTTCTGTTAATTCTGGTCAAAATGAACAGGGTAGTGGTATCAATCAAGGCACTGTAAAGGATGAGTTTCCAAGAGGTTCTGTAGCATCCACTAGCATGCCGCATACAACATCTGCTAGCTTGCCGCATACAACATCTGCTAGCTTGCCGCCAAATTCTGCTCCCCCTTCTGCTTCTCAACTAGATCCAACTGTCTCTTTAAGCTCTCAGATTCCAGCTAGCACTTCCGGTATTATGTCAAAGGCACCTCTAAAAAAAACTCCTCTTGGCCAGAAGAAACCACTTGAAGCGCTTGGTTCTTCACCTCCTCCTCCAAGTAAGAAACAAAAGGTGTCTGGCTCATCTCTGGAGCAAAGCATTGAGCAGCTTAATGATGTTGCTGCTGTTAGTGGTGTTGATCTTAGGGAAGAGGAAGAACAGTTATTTTCTGGGTCCAAGGACGACAGTCGAGTTTCAGAAGCATCTCGAAGAGTTGTGCAAGAAGAGGAGGAAAGTCTGATTTTGCTGAAAGGTCCATTGCAGAGAAAATTGATCGAGATTATGACCGAGTATGGCTTGAAAGGCATGAGTAATGATGTGGAAAAGTGCTTGTCACTGTGTGTGGAGGAGAGAATGCGTGGAGTAATAAGTAACATAATTAGAATGTCAAAACAGCGGGTTGATATTGAGAAAACAAGACACCGCACTGTTGTCACGTCAGATGTTCGACAGCAAATCATGGCAATGAATAGGAAAGCAAGGGAAGAGTGGGAGAAAAAACAGGCTGAAGCAGACAAGCTCCGAAAACTAAATGACGTAGACGGTGGTTCCGGAGTTGATGGTGACAAGGATAAGGATGATGGTCGCAATAAAGGAACAAAGATGAACAAGGATGTAGATGACAAGATGAGGACAAATGCTGCAAATGTTGCAGCCCGAGCTGCTGTTGGAGGAGATGACATGCTGTCAAAGTGGCAACTTATGGCTGAGCAAGCCAAGCAAAAACGTGAAGGGGGGACGGACACTGCATCTGGTTCTCAGCTACCTAAAGATGTCAGTCGCAAATCTTCACCTTCATCAGGAAGGAACACAAGAGATAATCAAGAAAGGGAGAGAAAAGGTCCAACTTCTCTTGGGAATTCAGCGGCTGCTAGGAAATTTGGGAAAAATCAATCCCCTGGATCTCACACTCGGATAGCTCGATTCATTCTGATACTTCAACCGAATAAGTAA 2802 0.4247 MDPSIVKLLEDDEDETMHSGADVEAFQAALNRDIGGDASNSQLSDSDAGSNNSFSQSLSTWPISSHDNQIDCQNQEPKIAQQQEQPSSEMVLKQEGPIVEQIQNVASQDASNLTLSHKKSQDECLQRQTVPVSHQHSQTNEVLKSEKDPVFNHEAIKTNNPNCESQYAKLQQMSNQQATVNEQPSSQVNRSKQVPFGLLLPILIPQLAKDRAMQLQTLFNKLKRDEIPKDNFVRLMKGIVGDQMLRIALSKVQQQVGRVDGLCRLTYVFSKMVEYQFQRYAKNHPFFLQTKANTSPSAQQHPVRMPSVTSSGTKFNDPHALAQLHQRSMGAAPDHSHNTSSAIQVKSEPTYSTMDINAKKSQDHDVRVVQPNQLPPSSSNAVSQETERSSVHIQGLNKQQQQHIHFPSTYGSSGGNYNPFSGTTTGSSPSLRPQPHPHDSHMRQIPHQNIGLSHLGVERQSSFNDPKRMPGGSVSAVVNNTASQQNPNSWQPSAEQNSGLFTSMSYVKKEPNDLSIEQQHRHHLSKLHGSPSVNSGQNEQGSGINQGTVKDEFPRGSVASTSMPHTTSASLPHTTSASLPPNSAPPSASQLDPTVSLSSQIPASTSGIMSKAPLKKTPLGQKKPLEALGSSPPPPSKKQKVSGSSLEQSIEQLNDVAAVSGVDLREEEEQLFSGSKDDSRVSEASRRVVQEEEESLILLKGPLQRKLIEIMTEYGLKGMSNDVEKCLSLCVEERMRGVISNIIRMSKQRVDIEKTRHRTVVTSDVRQQIMAMNRKAREEWEKKQAEADKLRKLNDVDGGSGVDGDKDKDDGRNKGTKMNKDVDDKMRTNAANVAARAAVGGDDMLSKWQLMAEQAKQKREGGTDTASGSQLPKDVSRKSSPSSGRNTRDNQERERKGPTSLGNSAAARKFGKNQSPGSHTRIARFILILQPNK 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00898 933 MobiDBLite consensus disorder prediction 332 357 - -
Tsu07g00898 933 MobiDBLite consensus disorder prediction 518 647 - -
Tsu07g00898 933 Gene3D Histone, subunit A 698 743 IPR009072 GO:0046982
Tsu07g00898 933 Coils Coil 773 793 - -
Tsu07g00898 933 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 399 922 IPR045144 GO:0005669|GO:0006352
Tsu07g00898 933 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 41 390 IPR045144 GO:0005669|GO:0006352
Tsu07g00898 933 MobiDBLite consensus disorder prediction 33 69 - -
Tsu07g00898 933 Pfam RCD1-SRO-TAF4 (RST) plant domain 190 254 IPR022003 -
Tsu07g00898 933 MobiDBLite consensus disorder prediction 34 69 - -
Tsu07g00898 933 MobiDBLite consensus disorder prediction 559 611 - -
Tsu07g00898 933 PANTHER IP01149P-RELATED 399 922 - -
Tsu07g00898 933 PANTHER IP01149P-RELATED 41 390 - -
Tsu07g00898 933 MobiDBLite consensus disorder prediction 861 886 - -
Tsu07g00898 933 MobiDBLite consensus disorder prediction 294 317 - -
Tsu07g00898 933 MobiDBLite consensus disorder prediction 367 434 - -
Tsu07g00898 933 MobiDBLite consensus disorder prediction 791 827 - -
Tsu07g00898 933 ProSiteProfiles RST domain profile. 187 258 IPR022003 -
Tsu07g00898 933 MobiDBLite consensus disorder prediction 852 921 - -
Tsu07g00898 933 MobiDBLite consensus disorder prediction 294 444 - -
Tsu07g00898 933 MobiDBLite consensus disorder prediction 906 920 - -
Tsu07g00898 933 MobiDBLite consensus disorder prediction 528 547 - -
Tsu07g00898 933 CDD TAF4 648 847 IPR007900 GO:0005669|GO:0006352
Tsu07g00898 933 Pfam Transcription initiation factor TFIID component TAF4 family 653 915 IPR007900 GO:0005669|GO:0006352
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00898 Tsu-Chr7 7328808 7343143 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00898 K03129 - gmx:100797127 1205.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00898 07 7328808 7343143 Tsu07g00898 07 7328808 7343143 ECH