Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00890 ATGCATGATAATCTGACTGCAGTAACATCTCATTTTATGGTCATTGTAAGCACAATGCATGAACGATGCAGTTCATCATTGGAGGTCTTATTTGCTTCTGGAAGTCTTGATGACCATAATGCTGCTTTTCTAAAAACTGATCTTTTGGAGGTGATGGACTTTATAAATGATGCAATTGTATCAATGGATGCTTTTGTTAGTGCATATGAACCAGCAGCTTTATGGTTCTCTTCCCCTGTTGAGATGAGTTATGGGAATGAAGAACTGCTGAGTTTCCTTGCCAGATTGCATGATTCGCTAATTCCTTCCATGCAAAAGGGGTTCCATATCATTTTTGCTGACAAACAAGATGACATGGTCTCTAATATTGTGGTTAGTTTGAAGATGTTAAGAACGAGATTGGTGAAGTTTGGGTGGCAATTATTGCACTTATGCTATTTAAGTGATGATGTGTTCCTAGATAGCATCCCTCTTCCAGCTGCCACAAAGATGTTTCCTGCCAACGTGGAAGACCCAGTCATCAGAGCAGATATTCTCGTTCAAACATTTAGAGAGATCAATTCAGTATCATTAAGTTTCCTTGAAATCTACAAGAAGGAAACCTTTCTTCAAGATGTTGAAAggaatttcaatatatttagCAGGATTGAGGGATTAAAGCATAATGGGTGGATATTCATCGATGATGAACAACTTAAATATATATCCGGGATTTTGAGTTCTCCGGAGGAGATTAATAAGGAGCCATATTCTTCAAAGATCCCTGTGCCGAAACAAGCCATGCAGGCTGATGAAGATGCTGTAGTTTTAGAGTCAAAAATCAGTCAAATTAGGGACCTATTCCCTGATTATGGTAAAGGGTATTTATCTGCATGTCTTGAGGTCTATGACCAGAATCCAGAAGAGGTTATTCAAAGAATTTTAGAAGGAACCCTGCATAAGGATCTGATGTGCTTGGATACTTCTTTAGAGACAGTGCCAAAGTCACCAGCCAAGTCTACCACTGTTAGCAGGAATGATAAAGGAAAAGGTATATTAATTGATTCTACGCCGGTGTCCTCAAATACCAAAGTTTTTAATGGGAAGCAACAGACGGTAGGGCCATTGATGCCATCCTCTGCTCCACTTGGAAAATTTGTTAGGAAATCTACAGCCGACATGCCTGATGCAAGTATTTTGGACAACAAGGATGAGAAAGATGCATTGCGAATTTTACaatatgaatatgatgatgaGTATGACGACTCTTTTGATGACTTGGGTCTAAGCGTAGCAGACTCGGGAgtagaagaaaatgaaatgcTTGACGACGAAATGAATGAAAAACCAGGGAAATCAAGGGCAACAGGGACTGGAAACTCTGTCCAAAATGCTTCTAATACAAAATGGGGCTCTAGGCAAAAGCCACAGTACTATGTCAAGGATGGTAAGAATTACAGCTACAAAGTGGCGGGTGCAGTAGCAGTTGCAAATTCTAATGAAGCTTCTTTAGTTAATGAAGCTCAGCAAGAATTGATATATGGCCTTGGACGTGGTGGCAACCTTCCTCTTGGTGCGGTACAGAAGTTGGCAGATTCCTACAAGGGAGGTGGTAACCAATTCCAAGTTTCTGAAACAGAAGGGAGAGGGAGTAGCAGTGGCAGGGGAAAGAGAGAAGGGGGAAGACATGTTGAACACAATCAGTATCAAGGAAAACAATCTGAAGTTTCTGAAGTGGAAGGTAGAGATCAGGGTCCAAATAacagagggagagggagagggagaggaaGACATATTGAACATAATCAATATCAAGAAAAACAATCTGATGTTTCTGAAGTGGAAGGTACAGATCAGGGTTCAACTAgcagagggagagggagaggaaGAGGGAGGGGAGGAGGTAGAAACAACCATTACAGGAAGGACCAAGCCATGAAGAAGCATTTCTCTGGATTGGGTGGTTTTTGA 1950 0.3877 MHDNLTAVTSHFMVIVSTMHERCSSSLEVLFASGSLDDHNAAFLKTDLLEVMDFINDAIVSMDAFVSAYEPAALWFSSPVEMSYGNEELLSFLARLHDSLIPSMQKGFHIIFADKQDDMVSNIVVSLKMLRTRLVKFGWQLLHLCYLSDDVFLDSIPLPAATKMFPANVEDPVIRADILVQTFREINSVSLSFLEIYKKETFLQDVERNFNIFSRIEGLKHNGWIFIDDEQLKYISGILSSPEEINKEPYSSKIPVPKQAMQADEDAVVLESKISQIRDLFPDYGKGYLSACLEVYDQNPEEVIQRILEGTLHKDLMCLDTSLETVPKSPAKSTTVSRNDKGKGILIDSTPVSSNTKVFNGKQQTVGPLMPSSAPLGKFVRKSTADMPDASILDNKDEKDALRILQYEYDDEYDDSFDDLGLSVADSGVEENEMLDDEMNEKPGKSRATGTGNSVQNASNTKWGSRQKPQYYVKDGKNYSYKVAGAVAVANSNEASLVNEAQQELIYGLGRGGNLPLGAVQKLADSYKGGGNQFQVSETEGRGSSSGRGKREGGRHVEHNQYQGKQSEVSEVEGRDQGPNNRGRGRGRGRHIEHNQYQEKQSDVSEVEGTDQGSTSRGRGRGRGRGGGRNNHYRKDQAMKKHFSGLGGF 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00890 649 MobiDBLite consensus disorder prediction 446 467 - -
Tsu07g00890 649 SUPERFAMILY UBA-like 268 326 IPR009060 GO:0005515
Tsu07g00890 649 CDD CUE_ASCC2 271 310 IPR041800 -
Tsu07g00890 649 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 2 560 - -
Tsu07g00890 649 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 575 647 - -
Tsu07g00890 649 SMART cue_7 269 311 IPR003892 GO:0043130
Tsu07g00890 649 MobiDBLite consensus disorder prediction 531 649 - -
Tsu07g00890 649 MobiDBLite consensus disorder prediction 569 583 - -
Tsu07g00890 649 MobiDBLite consensus disorder prediction 544 562 - -
Tsu07g00890 649 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 2 560 - -
Tsu07g00890 649 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 575 647 - -
Tsu07g00890 649 Pfam CUE domain 271 311 IPR003892 GO:0043130
Tsu07g00890 649 ProSiteProfiles CUE domain profile. 269 312 IPR003892 GO:0043130
Tsu07g00890 649 MobiDBLite consensus disorder prediction 590 606 - -
Tsu07g00890 649 Gene3D - 267 312 - -
Tsu07g00890 649 MobiDBLite consensus disorder prediction 434 469 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00890 K18667 - gmx:100778129 860.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00890 07 7288774 7293596 Tsu07g00890 07 7288774 7293596 ECH