Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00860 atgtcatcaTGGCTCGCTCGTTCCCTTGCAAACTCTCTTCGACTCGATCAAGATGACGACAACGACAACATTCAAAACGACACCGTAACCGATTCCTCAACAACTACCTCACCAACaaatcaacatcaacaacacAATAATAATGCACTTAGATCAGAATTAGAACAAAACCaagatgaagaagaacaatATGATGACGATGAAACGCAAGGTCGTGGTGGTGGTGTTAAAGAAGACCTTGACGAAATCAAACAAACCCTAACCCGTCAATTTTGGGGTATGGCTTCATTTCTCGCTCCTCCACCAACAACAATTTCTCAATctgatcaacaacaacaaattgtTGATGATGCTGTAATTTCGAATCAATCTTCGGATATGGAAAATGGTATTGTCCCTCACCCCAATTTGAATACATTTGGATCCGATTCGGAAGGGGAACCAGAACAGGACCTTCATATTCTTCAATCCGCGGTTGGAATTACGGAAGAGGTGCTGACTTTCGCAATGAATATCGCTATGCATCCTGAGACGTGGTTGGATTTTCCTATTGATGAGGAAGATGATACCCACGATTTTTACATGTCCGACGTCCAAAGAGATCATGCTATGGTTGTTGAAAGACTTGCTCCGAGATTAGCTGCGCTCAGAATTGAACTTTGCCCTTGCCATATGAGTGAAAGTTACTTCTGGAAGGTCTATTTTGTACTTTTGCATTCAAGGCTTAATAAACAAGATTCTGAGATTTTGTCTACACCCCAGGTCATGGTAGCCAGAGCAATGTGGATGCAGGAATTGCAGAAACAAACAAAGCCTGAATATGAACTTTACGGAAGAAGTGATCTCTACGCAAGAGACAATGCTCAGCATCATGATTCTACTCCCAGCTTATTAGATGACACCTATTCTGATGACATGCCTCATCGGACATACGGATATAGAACAACCTCTTCCTCTGTGGTGGCAGATAATGAGTCTGAGAAGTACACAGTCGAAAGTTCTGGATCACATTTCTCTGATAAGTCAGTTACTGAGGAAAATCCAATCATTAAAACTGAAAACAAGGATCTAAAAAGTGGTCGACCatctcaaattattattcagGACCATGATGACGGAGACGATGATTGGCCAGAGGATGATTCTGGATATGGAGGAATAACACTCCCTATTGTTAATGAAGAAGACATATCTTTCAGCGATCTTGAGGATGATGATTATGGCATTAAACATGTTAATACCAATTCAAGTTCAAAGGTGGTATAA 1266 0.3878 MSSWLARSLANSLRLDQDDDNDNIQNDTVTDSSTTTSPTNQHQQHNNNALRSELEQNQDEEEQYDDDETQGRGGGVKEDLDEIKQTLTRQFWGMASFLAPPPTTISQSDQQQQIVDDAVISNQSSDMENGIVPHPNLNTFGSDSEGEPEQDLHILQSAVGITEEVLTFAMNIAMHPETWLDFPIDEEDDTHDFYMSDVQRDHAMVVERLAPRLAALRIELCPCHMSESYFWKVYFVLLHSRLNKQDSEILSTPQVMVARAMWMQELQKQTKPEYELYGRSDLYARDNAQHHDSTPSLLDDTYSDDMPHRTYGYRTTSSSVVADNESEKYTVESSGSHFSDKSVTEENPIIKTENKDLKSGRPSQIIIQDHDDGDDDWPEDDSGYGGITLPIVNEEDISFSDLEDDDYGIKHVNTNSSSKVV 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00860 421 ProSiteProfiles BSD domain profile. 190 242 IPR005607 -
Tsu07g00860 421 PANTHER BSD DOMAIN-CONTAINING PROTEIN 3 417 - -
Tsu07g00860 421 MobiDBLite consensus disorder prediction 14 78 - -
Tsu07g00860 421 MobiDBLite consensus disorder prediction 354 389 - -
Tsu07g00860 421 SUPERFAMILY BSD domain-like 160 246 IPR035925 -
Tsu07g00860 421 MobiDBLite consensus disorder prediction 26 53 - -
Tsu07g00860 421 Coils Coil 40 70 - -
Tsu07g00860 421 SMART wurzfinal6 190 242 IPR005607 -
Tsu07g00860 421 PANTHER BSD DOMAIN-CONTAINING PROTEIN 3 417 - -
Tsu07g00860 421 Pfam BSD domain 191 246 IPR005607 -
Tsu07g00860 421 Gene3D BSD domain 157 252 IPR035925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00860 Tsu-Chr7 7036031 7040498 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00860 - - gmx:100801926 494.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00860 07 7036031 7040498 Tsu07g00860 07 7036031 7040498 ECH