Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00859 ATGGACCTTCTCCCATTCTCTCGAAGAAACCAAAAACGACTTCTCCTAATCGCCGTTTTAGGAGCTTCTGGTTATGGTGCTTACAAAGCCTATCATTTACCCTATGTTGTTCAAAAGAGGAACCGTTTCACCAAGCTTCTTAAAGCTTTCGTTTCTCTTGCTGAACTTGCTTCAAATTCCGCAGAAACAGTTTCAATTGTTTCTAACGATTTGAATCGATTTCTCACCTCTGATTCAGACGAAATTCCTAATAGTTTGAAACAGTTATCAAAAATTGCTACATCGGATGAATTTTCGATAACAATTTCTAGGGTTTCGGAGTCTTTAACAAAAGGAATTTTGATGGGGTATAATGATTGTAATAAATCCTCGGAAATTGGTTCAGAAAGTTCGAATTTTTCAGATAGGGTGTTGGAGAAGCTATTTTCTAAGGCTGGAACTGGTTTTGTATCAGTTGTGGTTGGTAGTTTTGCTAAGAATTTGGTTTTGGGTTTCAGTTTGAAATCAGGAAGTGTTGATGGTGAATTTGATTCGGGGTCTCGATCGGATGTTGTTCCTAGATGGGTGAGTGTGCTTTGTGATGAAAAGTGTGGGAAGGTTATAGGGGATTGTGTGCAGATTTTTGTGAGTACTGCTGTTGCTGTTTTTCTTGATAAAACAATGGATGTTAATACTTATGATGAATTGTTTGCTGGATTGACTAATCCTAAACACCATGAGAAAGTGAAGGCGGTTTTGGTTTCTGTTTGCAATGGTGCTGTTGAGACTTTAGTTAAAACATCTCATCAGGTTTTGACGAATCCAAATGTGAAATCCGATTCAAGTTCGCCGATGGAAAATGGGTGTTTGAAACCGGAAGCTTATGTTGGGCAATTCAGAATTGGGAGCTCTGTTAGTGGAGTTGGAGATTCTGGGTGGATTGAACAGATTAAATCAACTCTTTCTGTGCCAGCTAACCAGAGGTTTGTGCTTGATGTTACAGGGAGAGTGACATTCGAAACAGCGAGGTCATTTGTGGAGTTCTTGTTATGGAGAATATCAGAAGGTTTCAAAAAGGGTGTTAATAAGGTTCATGATGAGGTTGTAGACAGAGGAATACAGGTCGTTAGATATGTAGGAGCTAAGTCCAAGTGCCTCTCGATTGATAACATAAGTAGAGAAATGGCCGGAAGAAACGATCAAGCAATCGCGAAGGCTTTGGAAGCTATGGCTCAGGCGATAGCACATGCCAATGCGGCTCAACTAGAACAACAGAATCAGCAGGGAGGCGCTGATGAGTTTAGGCTGGATCTGTTCATGAGGAACAATCCACCCACCTTCAAAGGAAGGTATGATTCGGAGGACGCGGAGGTCTGGCTTCAGGGAATAGAGAGAATCTTCAGAGCAATGGCGTGTACTGATGCACAGAAGGTCATGCTGGCGACGCATATGCTAGCAGAAGTAGCTAGTTACTGGTGGGGGAATACGTGTCAGAGGCTAGAGGCTGCAGGTACCCTCATCACCTGGGATGGCTTTAAGGATGAGTTCCTGGGAAAGTATTTCCCCGCTTGTGAACGTACCAAGAAGGAAATAGAGTTTCTAGAGTTAAAGCAGGGAAACATGACCGTGGCTGACTATGCTGCCAAGTTTGAGGGGCTGTCCAGGTTTTGTCCCCTCTATAATACTGAAGGAGCTGAAGGGTCGAAGTGTGTCAAGTTTGAGAGCGGGTTGAGACCAGAGATCAAGCAATTCATCGGGTACCAGCAGATTCGCCAGTTTTCTGCATTGGTCAACAAGTGCAGGATCTATGATGAAGATAACAGGGCTAGGTCCAATCACTACAAGGCTGTGAATGAGAAAAAGAATGGGGGTCAGAATCGTAGTGAATACAGGTGGGAGAATACGCGTCAGAGGGTAGAGGCTGCAGATACCTTCACAACCTGGGATGACGTTAACGATGAGTTCTTGGGAAAGTATTTCCCTGCTGATGTACGTAGCAAGAAGGAGATAGAATTTCTAGAATTAAAGCAAGGAAACATGACCGTGGCTGACTATGCAGCCAAGTTTGAGGAGTTGTCCAGGTTTTGTCCCCCCTATAATGTTGTAGGAGCTGAAGGGTCAAAGTGTGTCAAGTTTGAGAGCGGATTGAGACCAGAGATCAAACAATTCATTGGGTACCATGAGATTCGCCAGTTTTCTGTATTGGTCAACAAGTGCAAGATCTTAGATGAAGACATCAGAGCTACGTCCAATCACTACAAGGTTGTGAATGAGAAAAAGAATCGGGGTCAGAATCGCAGTAAACCATATACAACTCCGAAGGGGAATAAGATTCTTAGGTAG 2322 0.4315 MDLLPFSRRNQKRLLLIAVLGASGYGAYKAYHLPYVVQKRNRFTKLLKAFVSLAELASNSAETVSIVSNDLNRFLTSDSDEIPNSLKQLSKIATSDEFSITISRVSESLTKGILMGYNDCNKSSEIGSESSNFSDRVLEKLFSKAGTGFVSVVVGSFAKNLVLGFSLKSGSVDGEFDSGSRSDVVPRWVSVLCDEKCGKVIGDCVQIFVSTAVAVFLDKTMDVNTYDELFAGLTNPKHHEKVKAVLVSVCNGAVETLVKTSHQVLTNPNVKSDSSSPMENGCLKPEAYVGQFRIGSSVSGVGDSGWIEQIKSTLSVPANQRFVLDVTGRVTFETARSFVEFLLWRISEGFKKGVNKVHDEVVDRGIQVVRYVGAKSKCLSIDNISREMAGRNDQAIAKALEAMAQAIAHANAAQLEQQNQQGGADEFRLDLFMRNNPPTFKGRYDSEDAEVWLQGIERIFRAMACTDAQKVMLATHMLAEVASYWWGNTCQRLEAAGTLITWDGFKDEFLGKYFPACERTKKEIEFLELKQGNMTVADYAAKFEGLSRFCPLYNTEGAEGSKCVKFESGLRPEIKQFIGYQQIRQFSALVNKCRIYDEDNRARSNHYKAVNEKKNGGQNRSEYRWENTRQRVEAADTFTTWDDVNDEFLGKYFPADVRSKKEIEFLELKQGNMTVADYAAKFEELSRFCPPYNVVGAEGSKCVKFESGLRPEIKQFIGYHEIRQFSVLVNKCKILDEDIRATSNHYKVVNEKKNRGQNRSKPYTTPKGNKILR 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00859 773 MobiDBLite consensus disorder prediction 749 773 - -
Tsu07g00859 773 Pfam Retrotransposon gag protein 625 710 IPR005162 -
Tsu07g00859 773 Pfam Retrotransposon gag protein 473 571 IPR005162 -
Tsu07g00859 773 PANTHER ZGC:172139 4 378 IPR019141 -
Tsu07g00859 773 PANTHER PROTEIN PHLOEM PROTEIN 2-LIKE A10 4 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00859 Tsu-Chr7 7028907 7034476 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00859 - - gmx:100810954 481.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00859 07 7028907 7034476 Tsu07g00859 07 7028907 7034476 ECH