Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00839 ATGATTCAAAGAACTATCAACTTTTCCAGTATAAAGAAAATTCTTCTTCAACCTGGTTATCTCTCTTCCTTTAAGATTGGAGCATACAATGGCTATACATCTCAGCCCTCCCCTCTTCCAATTCCAGACTCAACTTACAGtgaTGAAGATGAGTACGCTAATGTGGATTGGGACAGTCTTGGATTTGGATTGATGCCAACCGATTTCATGTATGTAACAAAATGTTGTGCGGGCCAAAATTTTGGACATGGACAACTCGATCGATATGGGAACATTGAACTTAGTCCATCTGCAGGGGTACTAAATTATGGTCAGGGATTATTTGAAGGAACCAAAGCATACAGAAAAGAAAATGGGAAGCTGATGCTATTCCGTCCAGAAGAAAATGCAATTCGCATGAAGATTGGTGCTGAAAGAATGTGCATGATTGCCCCTTCCATTGATCAATTTGTCGATGCTTTGAAACAAACCGCTCTAGCAAATAAGCGCTGGGTTCCTCCACCGGGAAAAGGATCGTTGTACCTTAGGCCTCTACTCATAGGAAGTGGTCCGGTTCTTGGTTTGGCTCCAGCACCTGAATATACATTCCTCATATATGCTTCCCCCGTTCGCAACTATTTCAAGGAAGGTTCTGCGCCCCTCAACTTGTATGTGGAAGAGGATTTTGACCGTGCTTCTCGCCGTGGCACTGGAAGTGTTAAAACTATTTCCAATTACGCACCGGTCTTGATGGCTCAAAGTATAGCCAAGAGCAAAGGATTTTCGGATGTGTTATATCTTGATTCAGACAATAAGAAAAATCTCGAGGAGGTCTCGTCTTGTAACATTTTTATTGCCAAGGGAAAAGTCATCTCAACACCTGCTATCAATGGAACCATACTTTCAGGAATCACCAGAAAGAGTGTAATTGAAATTGCCAGTGATTTAGGTTATCAGGTGGAAGAGCGTGTTGTTGCCGTGGATGAATTGGCTGAGGCGGATGAAGTTTTCTGTACAGGAACTGCCGTTGGTGTTGCCCCTGTTGGAAGTATCACATACCGGAATAGAAGGGTGGACTATAAAACAGGTTCTGGAACTATTTGTGAAAAGCTGTACAATACCATTTTAGGATTACAAACTGGTAGTATTGAAGATAAGAAAGGATGGATCGTTGAATTTGATTAA 1164 0.4184 MIQRTINFSSIKKILLQPGYLSSFKIGAYNGYTSQPSPLPIPDSTYSDEDEYANVDWDSLGFGLMPTDFMYVTKCCAGQNFGHGQLDRYGNIELSPSAGVLNYGQGLFEGTKAYRKENGKLMLFRPEENAIRMKIGAERMCMIAPSIDQFVDALKQTALANKRWVPPPGKGSLYLRPLLIGSGPVLGLAPAPEYTFLIYASPVRNYFKEGSAPLNLYVEEDFDRASRRGTGSVKTISNYAPVLMAQSIAKSKGFSDVLYLDSDNKKNLEEVSSCNIFIAKGKVISTPAINGTILSGITRKSVIEIASDLGYQVEERVVAVDELAEADEVFCTGTAVGVAPVGSITYRNRRVDYKTGSGTICEKLYNTILGLQTGSIEDKKGWIVEFD 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00839 387 PIRSF BCAT1 40 387 IPR005786 GO:0004084|GO:0009081
Tsu07g00839 387 CDD BCAT_beta_family 93 374 IPR033939 GO:0004084|GO:0009081
Tsu07g00839 387 Gene3D - 31 214 IPR043131 -
Tsu07g00839 387 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 45 383 IPR036038 GO:0003824
Tsu07g00839 387 Pfam Amino-transferase class IV 106 344 IPR001544 GO:0003824
Tsu07g00839 387 Gene3D - 215 386 IPR043132 -
Tsu07g00839 387 ProSitePatterns Aminotransferases class-IV signature. 270 299 IPR018300 GO:0003824
Tsu07g00839 387 PANTHER BRANCHED-CHAIN-AMINO-ACID AMINOTRANSFERASE 23 386 - -
Tsu07g00839 387 PANTHER AMINO ACID AMINOTRANSFERASE 23 386 IPR005786 GO:0004084|GO:0009081
Tsu07g00839 387 TIGRFAM ilvE_II: branched-chain amino acid aminotransferase 83 385 IPR005786 GO:0004084|GO:0009081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00839 Tsu-Chr7 6869156 6872864 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00839 K00826 - gmx:100782644 641.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00839 07 6869156 6872864 Tsu07g00839 07 6869156 6872864 ECH