Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00837 ATGTTGTTGGAACAGTTTATCCTGACAAAGGAAAACTTTTGGGATTGCAAGATACTAGCTTTTCAACAATGTACTAGAAATCTGTTGAGAAACTATGGCAAACTCGGAGAAGGTCGATGCTGGAAACCTCTCGGACTCAGAGAAGACAACAAACACAATGGGAAAATCCTTCCGAAATCTGGGAAATTCTTTGCATCTGCAACCGAACGCACACAAAGTTGGAACGGAATTCAGCAAGAGATCACTGGAAGAGTGCAGCGCAAGTTAGTGTATGAAGTCACTGCTTTAGTTCGGATATTTGGCAACAATGTCACTCCTTCTGATGTACGCGCTACATTGTATGTTCAAAAACCAGATTTTCGAGAGCAATATATCGGCATTTCCAATGTGCAGGCAACAGATAAAGATTGGACTCAAATTCAGGGAAAGTTCCTTCTAAATGATTCTCCCTCAAAAGTAATTGTTTATTTAGAAGGTCCTCCTGCAGGCACTGACATTCTTCTTAATACCTTGGTTATAAAACATGCAGCTAAAACACCGCCGTCATCACCACCGGATTTTGAGAATGTTGCTTTTGGTGTTAATATAATTGAGAATAGTAATCTGGATAATGGTATCAATGGCTGGTCTCCTCTTGGTAATTGTACTTTGAGCGTTGGAACTGGTTCACCACGTGTACTTCCGCCAATGGCAAGAGACTCTCTTGGTCCTCATGAATCTTTGAGTGGACGCTACATTCTCATAACCAACCGCACACAAACATATATGGGTCCTTCTCAGACAATCACTGAGAAATTGACACTCTATTTAACTTATCAAGTATCTGCTTGGGTTCGGATTAGTTCCGGATCACATGGACCTCAGAATGTGGGTATTGCCCTTAGTGTTGATGGCCAGTGGGTCAATGGAGGGCAAACTGAAGTTGCTGACAGCCGATGGCATGAAATCGGTGGTTCCTTTAGAATTGAAAAACAGTCAtctaatgtttttgtttatattcaAGGTCCTGTTTCTGGCGTTGACTTAATGGTTGCTGGTCTTCAAATTTTCCCTGTCGATAGGCAGGCGAGGTTTAGATATTTAAGGAAGCAGACAGACAAGATCCGTAAGCGTGATGTTACATTAAAATTTTCCGGGTTGGACACAAGCGAGTATACCTTTGTGAAAGTTAGACAATTACAGAATGATTTTCCAATTGGATCATGCATCAATAGAACAAATATTGACAACGAAGATTTTGTTGACTTCTTTGTGCAACATTTTAACTGGGCTGTATTTGGTAACGAGTTGAAGTGGTATTGGACTGAGCCACAACGAGGAAACTTGAACTACAAGGATGCCGATGATATGTTAGATTTATGTGAGAAGTACAAGATAGACATTCGCGGACATTGTATCTTCTGGGAAGTGGATGGCAATGTGCAGCAATGGATCAAATCACtgaataaaaatgatttaatgGCAGCTGTTCAAAATCGCTTAACTGGTTTATTGACTCACTACAAAGGCAAGTTCAAGCACTATGATGTTAACAATGAAATGTTGCACGGTTCGTTTTATCAGAACAGATTAGGTAAAGATATAAGGCCAAACATGTTCAAGACTGCACACCAACTAGATCCATCTGCTACCTTATTTGTGAATGATTATCATGTCGAAGATGGATGCGACACAAATTCATCTCCAGAAAAATACACACAACAGATTCTTGATTTGCAAGATCAAGGTGCCCCGGTTGGAGGAATCGGAATTCAAGGTCACATTGATAGTCCTGTTGGGTCTATTGTTTGTTCAGCACTCGATAAGTTGGCTACTCTCGGTCTACCAATTTGGTTTACCGAGCTTGATGTATCTTCCACTAATGAATATATTAGAGGTGATGACTTGGAAGTTATGCTACGCGAAGCTATGGCACACCCTGCCGTAGATGGTGTAATGTTATGGGGATTTTGGGAATTGTTTATGAGCCGCGACAATGCACATTTGGTGAATGCAGAAGGTGAAATCAATGAAGCTGGGAGAAGATTTCTTGATCTTAAAGAAGAGTGGTTATCTCATACTCATGGTCATGTTGATGAGCAAGGAGAATTCAGCTTTAGAGGATTCAGTGGTTTGTACAATGTGGAACTTGTTACCTTTGAAAAGGAAATTTCTAAGACATTTGTTGTTGATAAGAGTGACTCTTCATTGGTGATATCAATTGATTTGTAA 2211 0.3985 MLLEQFILTKENFWDCKILAFQQCTRNLLRNYGKLGEGRCWKPLGLREDNKHNGKILPKSGKFFASATERTQSWNGIQQEITGRVQRKLVYEVTALVRIFGNNVTPSDVRATLYVQKPDFREQYIGISNVQATDKDWTQIQGKFLLNDSPSKVIVYLEGPPAGTDILLNTLVIKHAAKTPPSSPPDFENVAFGVNIIENSNLDNGINGWSPLGNCTLSVGTGSPRVLPPMARDSLGPHESLSGRYILITNRTQTYMGPSQTITEKLTLYLTYQVSAWVRISSGSHGPQNVGIALSVDGQWVNGGQTEVADSRWHEIGGSFRIEKQSSNVFVYIQGPVSGVDLMVAGLQIFPVDRQARFRYLRKQTDKIRKRDVTLKFSGLDTSEYTFVKVRQLQNDFPIGSCINRTNIDNEDFVDFFVQHFNWAVFGNELKWYWTEPQRGNLNYKDADDMLDLCEKYKIDIRGHCIFWEVDGNVQQWIKSLNKNDLMAAVQNRLTGLLTHYKGKFKHYDVNNEMLHGSFYQNRLGKDIRPNMFKTAHQLDPSATLFVNDYHVEDGCDTNSSPEKYTQQILDLQDQGAPVGGIGIQGHIDSPVGSIVCSALDKLATLGLPIWFTELDVSSTNEYIRGDDLEVMLREAMAHPAVDGVMLWGFWELFMSRDNAHLVNAEGEINEAGRRFLDLKEEWLSHTHGHVDEQGEFSFRGFSGLYNVELVTFEKEISKTFVVDKSDSSLVISIDL 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00837 736 PRINTS Glycosyl hydrolase family 10 signature 543 554 IPR001000 GO:0004553|GO:0005975
Tsu07g00837 736 PRINTS Glycosyl hydrolase family 10 signature 461 473 IPR001000 GO:0004553|GO:0005975
Tsu07g00837 736 PRINTS Glycosyl hydrolase family 10 signature 575 587 IPR001000 GO:0004553|GO:0005975
Tsu07g00837 736 SMART glyco_10 430 680 IPR001000 GO:0004553|GO:0005975
Tsu07g00837 736 Pfam Carbohydrate binding domain 195 336 IPR003305 GO:0016798
Tsu07g00837 736 Pfam Carbohydrate binding domain 59 161 IPR003305 GO:0016798
Tsu07g00837 736 Pfam Glycosyl hydrolase family 10 393 650 IPR001000 GO:0004553|GO:0005975
Tsu07g00837 736 PANTHER GLYCOSYL HYDROLASE 49 736 IPR044846 GO:0004553|GO:0005975
Tsu07g00837 736 SUPERFAMILY Galactose-binding domain-like 53 176 IPR008979 -
Tsu07g00837 736 PANTHER ENDO-1,4-BETA-XYLANASE A-LIKE PROTEIN 49 736 - -
Tsu07g00837 736 Gene3D Glycosidases 383 691 - -
Tsu07g00837 736 SUPERFAMILY (Trans)glycosidases 388 686 IPR017853 -
Tsu07g00837 736 Gene3D - 26 176 - -
Tsu07g00837 736 Gene3D - 191 350 - -
Tsu07g00837 736 ProSitePatterns Glycosyl hydrolases family 10 (GH10) active site. 607 617 IPR031158 -
Tsu07g00837 736 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 384 679 IPR001000 GO:0004553|GO:0005975
Tsu07g00837 736 SUPERFAMILY Galactose-binding domain-like 193 353 IPR008979 -
Tsu07g00837 736 Coils Coil 662 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00837 Tsu-Chr7 6849746 6853264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00837 49 736 Glycoside Hydrolase AT1G58370 71.532 0.0 1055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00837 - - gmx:100784250 1202.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00837 07 6849746 6853264 Tsu07g00837 07 6849746 6853264 ECH