Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00801 atggattCTTCTCAAGGTTCTACGTTGGCTGGTTTGGTGAATAATGCATCTATTCAGAGAGATGAATCTAGACTCGATCGTGTTCCTGTTTATGTTAAGGAGCTAATTGCTGGTGGTTGTGCCGGTGCTCTTGCTAAGACTTCCGTTGCACCTCTCGAACGGGTCAAGATACTTTGGCAGACAAGGACTGGAGGATTCCATACTCTTGGTGTGTACCAATCTATGAATAAGTTGACAAAAAATGAAGGTTTTCTAGGACTATATAAAGGAAATGGAGCCAGTGTTATCCGGATTGTTCCATATGCAGCCTTGCATTTTATGACATACGAGCGGTATAAAAGTTGGATCCTGGACAATTATCCCATGTTGGGAACGGGTCCTTCTATCGATCTTTTAGCTGGCTCAGCAGCTGGTGGAACTTCAGTTTTATGTACATACCCCTTAGATCTTGCCCGTACCAAACTTGCTTATCAGGTGGTCGACACAAAAGGATGTATCAAAGATGGTATTAAAGGAGTTCATTCTCAAGCTGTAGGTCCTGTACACAATGGGATTAAAGGTGTACTTACAAGTGCCTATAAGGAAGCTGGAGTTCGTGGACTTTATAGAGGTGTAGGTCCAACCCTTACTGGAATTCTTCCATATGCTGGTTTAAAGTTCTATACGTATGAGAAGTTAAAGATGCATGTTCCTGAAGAACATCAGAAGTCCATTTTGATGCGTCTTTCCTGTGGAGCTCTTGCTGGATTGTTCGGGCAGACTTTAACGTACCCTTTGGATGTTGTTAAGAGACAAATGCAGGTTGGAAGCCTGCAAAATGCAGCAGCTGGTGGTGCCAGATACAGGAATACATTTGATGGACTTAGGACGATTGTTCGAAATCAAGGGTGGAAGCAGTTGTTTGCAGGCGTGAGCATTAACTACATAAGGATTGTTCCATCAGCTGCAATTAGCTTCACCACATATGACATGATGAAGGTTTGGCTTGACGTACCACCTCAACAGAAGTCTAAATCAGTTTCAGCAGGATAG 1032 0.4283 MDSSQGSTLAGLVNNASIQRDESRLDRVPVYVKELIAGGCAGALAKTSVAPLERVKILWQTRTGGFHTLGVYQSMNKLTKNEGFLGLYKGNGASVIRIVPYAALHFMTYERYKSWILDNYPMLGTGPSIDLLAGSAAGGTSVLCTYPLDLARTKLAYQVVDTKGCIKDGIKGVHSQAVGPVHNGIKGVLTSAYKEAGVRGLYRGVGPTLTGILPYAGLKFYTYEKLKMHVPEEHQKSILMRLSCGALAGLFGQTLTYPLDVVKRQMQVGSLQNAAAGGARYRNTFDGLRTIVRNQGWKQLFAGVSINYIRIVPSAAISFTTYDMMKVWLDVPPQQKSKSVSAG 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00801 343 PANTHER SOLUTE CARRIER FAMILY 25 7 337 - -
Tsu07g00801 343 Gene3D Mitochondrial carrier domain 28 330 IPR023395 -
Tsu07g00801 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 236 328 IPR018108 -
Tsu07g00801 343 SUPERFAMILY Mitochondrial carrier 32 324 IPR023395 -
Tsu07g00801 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 29 115 IPR018108 -
Tsu07g00801 343 PANTHER GRAVES DISEASE MITOCHONDRIAL SOLUTE CARRIER PROTEIN-LIKE 7 337 - -
Tsu07g00801 343 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 229 IPR018108 -
Tsu07g00801 343 Pfam Mitochondrial carrier protein 129 230 IPR018108 -
Tsu07g00801 343 Pfam Mitochondrial carrier protein 31 119 IPR018108 -
Tsu07g00801 343 Pfam Mitochondrial carrier protein 236 329 IPR018108 -
Tsu07g00801 343 PRINTS Mitochondrial carrier protein signature 245 267 IPR002067 GO:0055085
Tsu07g00801 343 PRINTS Mitochondrial carrier protein signature 90 110 IPR002067 GO:0055085
Tsu07g00801 343 PRINTS Mitochondrial carrier protein signature 47 61 IPR002067 GO:0055085
Tsu07g00801 343 PRINTS Mitochondrial carrier protein signature 34 47 IPR002067 GO:0055085
Tsu07g00801 343 PRINTS Mitochondrial carrier protein signature 140 158 IPR002067 GO:0055085
Tsu07g00801 343 PRINTS Mitochondrial carrier protein signature 202 220 IPR002067 GO:0055085
Tsu07g00801 343 PRINTS Graves disease carrier protein signature 51 71 IPR002167 GO:0005743
Tsu07g00801 343 PRINTS Graves disease carrier protein signature 291 311 IPR002167 GO:0005743
Tsu07g00801 343 PRINTS Graves disease carrier protein signature 26 46 IPR002167 GO:0005743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00801 Tsu-Chr7 6573752 6577608 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00801 113 337 Organic Solute Cotransporters AT4G26180 27.660 5.18e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00801 - - gmx:100784421 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00801 07 6573752 6577608 Tsu07g00801 07 6573752 6577608 ECH