Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00790 ATGAGAATGAAAAGtatgaggaagaagaagaagggtgGTGCCACTGGTGGTGGTGGCGGCGAAGAAAATGAACTAAAAGCGGCGAAGTTGAAGGGAGCAGAAAGATCAGCGTATTTCGCAAGGAGAGAAGCAGCCAAGATATTGAGAAGTGTTCTTGAAGGAGACGCTAAACGTCGTGCACTTGCTTCTATCAAAACCCTAGTTTATCATCCTTCTGTTAGAAACAAGAAAGCCACTTTTGCTCTCATCTGTCAAACCCTCAAacATCTTCCCATTATCAATGATGTCTTGAAATCTGCTTCTATACTCAACACCAAGTGGAAGAAGCAAGAAGCATTGGTCTATATAATTGTCTATGATATCCTTTTCGGCCAGGCAGTTCCACTGGTTGGTGATGCAGAGAAGTATCTCATGCGCCACAAGGACGCACTACATTTACATCTGAAAAAGATTCTGACACAAAGAAATGTGACAACTGTTAAAGAGTTGTTTGCTCTACACGAGGTTCCTGATGTTTCTGTACCTCGAAATGTTCGTGTGAATACGCTTAAGCTGGATGTTGATTCAGCCTTAGTTGAACTTCAGAAAAAATACTCGGTTCAAAAGGATGATTTACTGCCTGACTTGCTGATACTCCCTCCAGGAACTGATTTACATGATCACCCTCTTGTCAAGAATGGAAGCATATTTCTCCAAGGAAAGGCGAGTTCCATGGTGGCACCGGCTCTTAGCCCTGAACCAGGATGGGAGGTTCTTGATGCATGCGCAGCACCAGGCAACAAAACTGTCCACCTTGCTGCCCTTATGAAGAGAAAGGGTAGGATTATAGCATGTGAGCTGAAAAATGAAAGGATTAAGCGCTTGAACGACACTATAAAGCTATCTGGGGCTTCCAACATACAGGTTCTCAATGAGGATTTCTTGAACATAAATCCCAAGGATCCTTCATACTCTAAGATAAAAGCTATTCTTTTGGATCCTTCCTGCTCGGGTTCTGGTACTGCTGCTTCTAGACTAGACCATCTGCTCCCATCTAAAGTAGCAGGTCAGGATATTGATACGGAAAGATTGAACAAGCTTGCAGCTTTTCAGAGAAAAGCACTTCACCATGCCTTCCTTTTTCCAGCTTTGGAAAGAGTTGTGTACAGTACATGTTCAATAAACCAAGTTGAGAATGAAGATGTTGTGAAATCAGTTCTGCCCATAGCTGAGTCATATGGATTCCAACTAGCAAAACCCTTCCCCGAGTGGCAGTGTCGTGGTCTTCCGGTGTTTGAAGGCTCTGAAAACCTTGTTCGGACAGATCCTGCCAAGCACGGCGAGGGTTTCTTCATTGCTTTGTTTGCCAAGAAAGACGCTAACCTTTCAGCGAGgtcaaataaaaatgataacCGGACTCTCCGTGGTTCTACCAAAACCAGAAACTTGCGAAGGAAGAAACCAATTTTCATTCACACTAATCTGTTCAGAATGTGGTTATATGGTCAACTATAA 1494 0.4224 MRMKSMRKKKKGGATGGGGGEENELKAAKLKGAERSAYFARREAAKILRSVLEGDAKRRALASIKTLVYHPSVRNKKATFALICQTLKHLPIINDVLKSASILNTKWKKQEALVYIIVYDILFGQAVPLVGDAEKYLMRHKDALHLHLKKILTQRNVTTVKELFALHEVPDVSVPRNVRVNTLKLDVDSALVELQKKYSVQKDDLLPDLLILPPGTDLHDHPLVKNGSIFLQGKASSMVAPALSPEPGWEVLDACAAPGNKTVHLAALMKRKGRIIACELKNERIKRLNDTIKLSGASNIQVLNEDFLNINPKDPSYSKIKAILLDPSCSGSGTAASRLDHLLPSKVAGQDIDTERLNKLAAFQRKALHHAFLFPALERVVYSTCSINQVENEDVVKSVLPIAESYGFQLAKPFPEWQCRGLPVFEGSENLVRTDPAKHGEGFFIALFAKKDANLSARSNKNDNRTLRGSTKTRNLRRKKPIFIHTNLFRMWLYGQL 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00790 497 MobiDBLite consensus disorder prediction 1 24 - -
Tsu07g00790 497 CDD AdoMet_MTases 251 339 - -
Tsu07g00790 497 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 177 451 IPR029063 -
Tsu07g00790 497 Pfam 16S rRNA methyltransferase RsmB/F 242 448 IPR001678 GO:0008168
Tsu07g00790 497 Gene3D Vaccinia Virus protein VP39 232 458 IPR029063 -
Tsu07g00790 497 PANTHER BNAA09G04380D PROTEIN 33 474 - -
Tsu07g00790 497 Gene3D Sun protein; domain 3 167 231 - -
Tsu07g00790 497 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 166 451 IPR001678 GO:0008168
Tsu07g00790 497 PRINTS RNA (C5-cytosine) methyltransferase signature 252 262 IPR023267 GO:0001510
Tsu07g00790 497 PRINTS RNA (C5-cytosine) methyltransferase signature 377 393 IPR023267 GO:0001510
Tsu07g00790 497 PRINTS RNA (C5-cytosine) methyltransferase signature 433 450 IPR023267 GO:0001510
Tsu07g00790 497 PRINTS RNA (C5-cytosine) methyltransferase signature 223 237 IPR023267 GO:0001510
Tsu07g00790 497 PRINTS RNA (C5-cytosine) methyltransferase signature 321 333 IPR023267 GO:0001510
Tsu07g00790 497 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 33 474 IPR023267 GO:0001510
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00790 Tsu-Chr7 6470831 6475679 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00790 K15264 - gmx:100811850 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00790 07 6470831 6475679 Tsu07g00790 07 6470831 6475679 ECH