Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00777 atgGGTGAGGCTCCTCAGCTACTCTACGTTAATGGATTCTCAAAGTTTGGCCATGACTATGATGATCAAATAGAACAACACCTTGCCAATAACTTCGACCATGATTTTTCATGGTACGAGGAAGTTATCGATGATGATCTCAAATGGTCTTTTGCTTTGAACAGTGTGCTTCATAAAGGGATTAGTGATTACCAAGAGATAGCTCTTTTGGATACAAAGCGTTTTGGAAAGGCCCTAGTGATTGATGGGAAGATGCAAAGTGCTGAAATGGACGAATTTATTTATCACGAATGCTTGATTCATCCCCCTCTCTTATGTCACCCCGACCCTAAAAGAGTATTTATAATGGGAGGAGGTGAAGGGTCTGCTGCTAGGGAATCCCTCAAGCACAAGTCAGTAGAGAAAGTTATCATGTGCGATATAGACCAGGAAGTGGTAGATTTTTGCAAAAAATACTTGATTACAAACAGGGAGGCCTTTGCTCATAAGAAGCTCAACCTTGTCATCAATGATGCTAAGGTGGAattagagaaaagaaaagagaaatttgaTATCATTGTTGGAGACTTGGCAGACCCAGTTGAAGGTGGACCTTGCTATCAACTTTATACAAAATCTTTCTATGAAAATATCCTCAAACCCAAGCTCAATGAGAATGGCATTTTTGTCACTCAGGCTGGACCGGCAGGTATCTTGACGCACAAGGAAGTCTTCACttctatatataatacaatCAAACAAGTATTTAAATGTAAGAAATTTAAGTAA 768 0.3802 MGEAPQLLYVNGFSKFGHDYDDQIEQHLANNFDHDFSWYEEVIDDDLKWSFALNSVLHKGISDYQEIALLDTKRFGKALVIDGKMQSAEMDEFIYHECLIHPPLLCHPDPKRVFIMGGGEGSAARESLKHKSVEKVIMCDIDQEVVDFCKKYLITNREAFAHKKLNLVINDAKVELEKRKEKFDIIVGDLADPVEGGPCYQLYTKSFYENILKPKLNENGIFVTQAGPAGILTHKEVFTSIYNTIKQVFKCKKFK 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00777 255 Gene3D Vaccinia Virus protein VP39 88 254 IPR029063 -
Tsu07g00777 255 Pfam Spermidine synthase tetramerisation domain 38 89 IPR035246 -
Tsu07g00777 255 Pfam Spermine/spermidine synthase domain 92 251 - -
Tsu07g00777 255 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 36 255 IPR030374 -
Tsu07g00777 255 Coils Coil 162 182 - -
Tsu07g00777 255 PANTHER BNAA02G04280D PROTEIN 1 253 - -
Tsu07g00777 255 CDD AdoMet_MTases 112 225 - -
Tsu07g00777 255 Gene3D Spermidine synthase, tetramerisation domain 37 87 IPR037163 -
Tsu07g00777 255 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 37 250 IPR029063 -
Tsu07g00777 255 PANTHER THERMOSPERMINE SYNTHASE ACAULIS5 1 253 - -
Tsu07g00777 255 Hamap Polyamine aminopropyltransferase [speE]. 37 250 IPR001045 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00777 Tsu-Chr7 6402873 6405939 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00777 K18787 - gmx:100784972 436.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00777 07 6402873 6405939 Tsu07g00777 07 6402873 6405939 ECH