Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00766 ATGGATACTAAAAGAGTATATGGGTCCATCATTGTAGCATGGCTTACATTGTTCCAAGGAAACATGTTACTTGTTAGGGGTCAATTTAATTACAAGGAAGCTCTCACAAAATCTCTTATTTTCTTAGAGGCACAAAGATCAGGAAAACTACCTCCCAATAACAGGGTCCCTTGGAGAGGAGACTCGGCACTCGATGACGGAAAGCTCGCTAAtGTGGATCTATCTGGTGGATATTATGATGCAGGGGATAATGTGAAATATGGTCTACCAATGGCATTTACAGTTACTACATTATCATGGGCTGCAATATTTTACAAAGCAGAATTTGAAGCAACAAATGAAATGGGAAATATTCAAGATGCTATTAAATGGGGCACGGATTATTTTCTAAAAGCTAGTTCaagaagaaataaattatatgtTGAGGTAGGTGACCCTGTTGATGATCACAATTGTTGGGCTCCACCAGaaaaaatgaagacaaaaagATCAGTTAAAGTAATTGATACTAACACACCTGGTAGTGAGATTGCTGCTGAAACTGCTGCTGCAATGGCTGCTTCTTCGATCGTTTTTAGACAAGTTAATCGTAAATATGCTCGGAGTCTACTCAACAAAGCAAAACTGCTTTTCGATTTTGCGAAATCGCATAAAACAACCTATGATGGAGAATGTCCCTTCTACTGCTCCTATTCGGGCTACAATGATGAATTGATGTGGGCAGCAACATGGCTATACATGGCAACAAAGAAATCAATATACATGAAATATATACAAGAAGAAGCAATTAGTGCTAGTGTAGCTGAATTCAGCTGGGACCTTAAATATGCTGGAGTTCAAGTTCTTCTAACTCAATTACATTTTGAAGGACAAAAAGGTCTTGAAACATTCAAAGCACACGGTGAAAGTTACATATGTTCGGTCCTTCCTGATAGTCCTTACCACCAAATCAATTTATCTCCCGCTGGATTTATTCATATGAGAGATGGAGCCAACACACAATATGCCACCAGTACATCTTTCTTGTTCACTGTATATAGTGATTTGCTTGCCAAATATAATCAGAAAGTCAAATGTGGAAACAAAGAATTTGACTCAACTCATCTCCTTGATTTTGCAAAAAAACAAATGGATTACATATTGGGAAAAAATCCAGAAGGAAGATCATACATGGTAGGATTTGGGAAAAACCCACCAACACAAGCTCATCATAGAGGTGCTTCAGTGCCAAAATTGGCACCAAATGAAGAGATAGATTGTCCCACTAGCTTTGCAAAATGGCTTCAAAGAGATGCACCAAATCCACATGAGCTAACTGGAGCCATTATGGGTGGACCTGACATTAATGACCATTTTGATGATAAACGTACGGATTCACCTAAGACTGAACCTTGTACTTATGTTAATTCTCTTGCAGCAGGTGCTCTAGCTAAGCTTGCTTCATTGGGTTAA 1452 0.3795 MDTKRVYGSIIVAWLTLFQGNMLLVRGQFNYKEALTKSLIFLEAQRSGKLPPNNRVPWRGDSALDDGKLANVDLSGGYYDAGDNVKYGLPMAFTVTTLSWAAIFYKAEFEATNEMGNIQDAIKWGTDYFLKASSRRNKLYVEVGDPVDDHNCWAPPEKMKTKRSVKVIDTNTPGSEIAAETAAAMAASSIVFRQVNRKYARSLLNKAKLLFDFAKSHKTTYDGECPFYCSYSGYNDELMWAATWLYMATKKSIYMKYIQEEAISASVAEFSWDLKYAGVQVLLTQLHFEGQKGLETFKAHGESYICSVLPDSPYHQINLSPAGFIHMRDGANTQYATSTSFLFTVYSDLLAKYNQKVKCGNKEFDSTHLLDFAKKQMDYILGKNPEGRSYMVGFGKNPPTQAHHRGASVPKLAPNEEIDCPTSFAKWLQRDAPNPHELTGAIMGGPDINDHFDDKRTDSPKTEPCTYVNSLAAGALAKLASLG 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00766 483 PANTHER ENDOGLUCANASE 16-RELATED 11 480 - -
Tsu07g00766 483 Pfam Glycosyl hydrolase family 9 31 476 IPR001701 GO:0004553|GO:0005975
Tsu07g00766 483 PANTHER ENDO-1,4-BETA-GLUCANASE 11 480 - -
Tsu07g00766 483 SUPERFAMILY Six-hairpin glycosidases 29 480 IPR008928 GO:0005975
Tsu07g00766 483 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 379 405 IPR018221 -
Tsu07g00766 483 Gene3D - 26 483 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00766 Tsu-Chr7 6310810 6313382 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00766 21 481 Glycoside Hydrolase AT3G43860 69.048 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00766 K01179 - gmx:100811509 806.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00766 07 6310810 6313382 Tsu07g00766 07 6310810 6313382 ECH