Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00713 ATGAGATGCAGTGTGATAATTGTTCTATTGGCTTTATTGAGCTTAAACAAATTTTGTGAGTCAACCTCATCTTGTAAAGCATGGCTAGTGCAATCTATCCCGACCGATATGCCTCACCTCTCCCACGTTCCAGGAGTACTCTCCACCGGAGATGTGCTGCGGTGGATGGCTGCAAACTCGACTCGTAGACTTGATGTTATTGCTCAGTACTGGCAACTACTAGCTTCCCCTGATGATCCGCGTTCTGGTGATTACGGTTATACTCAAGATCAGATGCAGAAATTTGGTGCTCATCAAGGTGCTGCAGTTTATCAAGCATTAGATGATGCTGCAGACCGTAATGTTAATATTAGGTTACTGTCTCATTCTGGGGTTTATCCAACATTTACTTTAGAACCATCCAAACTTGCTTCTGGAAGGCCAAATGTTAAGAATGTAACTTTGCTACTGAAGGATTGGTGGGGCTCTGGCATTGTCCATGCCAAAGTTTGGATTTCTGATAATAGGGATGTCTATATTGGATCTGCAAACAATGACTGGAAATCGCTTACGCAGGTCAAAGAAGTTGGAATTTATCTTGCTGGTTGTCCTGGAATAGCTAAAAAGGTTGAGGTCTATTTTAACAATTTATGGACACTAGCATCTCTCAATTCTTCAGCTTACACAAAAACAGTGATGGATCAACAGTGGCAAGTTGAAAGAAAGGTTCCTTGTTGGTCACATTTCATCAAACCTAGAGATAGGTGCAAGTCACCACTTTCTCAATCTGTGAAGACACCTCATGTTGCAGGATATCCTATTCTGTCTGACCCGTATGTGTTTGAAGCCTCAATTCAAACTCCTGGGAGTAACTATTCAACAAAACTTCCCCAAGTCAATTATCTCTCCTTTGCTCCCCCAGAGCTATCATTTGGCAGTTATCAGAGTGATGAGCAGGCATGGATTGATACAATTAAATCTGTTGGAACAAGGGAGACAGTTAGAATCAATACCATGGACTGGCTAGGTCAGTCACAGTTTACAGACCAAACAATTTTCTGGTCATCTTTATCGTCCGCTATATCAGAGGTTGTGTTTTCCAAGCATGCAACAGTGAAGATACTGGTAGCATATTGGGCACACTTCATCAATAGCACAGATGAGTACTTAAAATATCTCCTCTACACCAACAATCTATGCTCTTCTTCAAAATACAACAAATGTTCCGGTAAAGTTGAGATCAAATATTATGTGGTACCAGGTTTCAACAATACAGGACCTGCCATTCAAGGTGAAAATAGTACAGGAAATATATACCCTGATTTTACAAGAGTCAATCATGGAAAATATGCAGTTAGTAATGTAAGGGCTCACATTGGGACAAGCAACCTTGTATGGGACTATTTCTATGTTACAGCAGGTGTTAGCTTTGGGACATACAACACTGCTATTGTATCTCAACTTAGGGAAATATTTGATGCTGACTGGAACTCGCCATATGCTGTTCCTATTCAAGAGCTAGAGAGAGTGTATATTTCTAGTTTCAAATAG 1530 0.4065 MRCSVIIVLLALLSLNKFCESTSSCKAWLVQSIPTDMPHLSHVPGVLSTGDVLRWMAANSTRRLDVIAQYWQLLASPDDPRSGDYGYTQDQMQKFGAHQGAAVYQALDDAADRNVNIRLLSHSGVYPTFTLEPSKLASGRPNVKNVTLLLKDWWGSGIVHAKVWISDNRDVYIGSANNDWKSLTQVKEVGIYLAGCPGIAKKVEVYFNNLWTLASLNSSAYTKTVMDQQWQVERKVPCWSHFIKPRDRCKSPLSQSVKTPHVAGYPILSDPYVFEASIQTPGSNYSTKLPQVNYLSFAPPELSFGSYQSDEQAWIDTIKSVGTRETVRINTMDWLGQSQFTDQTIFWSSLSSAISEVVFSKHATVKILVAYWAHFINSTDEYLKYLLYTNNLCSSSKYNKCSGKVEIKYYVVPGFNNTGPAIQGENSTGNIYPDFTRVNHGKYAVSNVRAHIGTSNLVWDYFYVTAGVSFGTYNTAIVSQLREIFDADWNSPYAVPIQELERVYISSFK 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00713 509 Pfam PLD-like domain 100 211 IPR025202 -
Tsu07g00713 509 PANTHER GM01519P-RELATED 5 501 - -
Tsu07g00713 509 SUPERFAMILY Phospholipase D/nuclease 306 503 - -
Tsu07g00713 509 Gene3D Endonuclease Chain A 295 492 - -
Tsu07g00713 509 CDD PLDc_vPLD3_4_5_like_1 29 196 - -
Tsu07g00713 509 CDD PLDc_vPLD3_4_5_like_2 294 490 - -
Tsu07g00713 509 SMART pld_4 155 182 IPR001736 GO:0003824
Tsu07g00713 509 SMART pld_4 435 461 IPR001736 GO:0003824
Tsu07g00713 509 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 155 182 IPR001736 GO:0003824
Tsu07g00713 509 SUPERFAMILY Phospholipase D/nuclease 61 213 - -
Tsu07g00713 509 Gene3D Endonuclease Chain A 49 215 - -
Tsu07g00713 509 PANTHER PHOSPHOLIPASE D - RELATED 5 501 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00713 K16860 - gmx:100778897 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00713 07 5847346 5850604 Tsu07g00713 07 5847346 5850604 ECH