Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00711 ATGATGCTTCGATTTCTACTTGTGGTTGTTATGTTGATAAGTTGTACGGACACATACAAAATGGTTAAAGGAGATGAATACACACTTGAATCAGTGAGAGCATCTTTGATTAGACAAGAAGATACGATCGTGTTTAATGTGATTGAAAGAGCAAGGTTTCCTCTCAATTCTCCTACCTATGATCAACATTATGCTTCCATTCCCAATTTTTCTGGCTCATTGTTCGACTTCATTCTTAACCAGACAGAGGATATTCAAGCCAAGATGGGAAGATATATCAACCCTGAAGAAAATTCCTATGAAGAAAATTTACCGGTCTCACTTGTGCCACACTACAACTTTTCACAGTTTTTGCATCCTACAGCTGCTTCGGTTAACATAAACAAGAGTATAAGAAAAGTGTATTTCCACGAGATGCTTCCACTTTTTGTTACTTCTAAGGATGATGGCAACTATGCACAAACTGCAACAAGCGATCTTTCATTATTGCAGGCCATCTCTAGAAGGATTCATTATGGAAAGTTTGTAGCTGAGGCGAAGTTCAAGGAATCTCCTCACGACTATGAGCCTTTAATTCGTGCCAAGGACAAAAAATCATTGATGAAATTGTTGACAGTGAAGAGTGTGGAGGATATAGTTGTGAAGAGAGTTGAAAAGAAGGCAATGGTGTTTGGACAAAAAGTGAGCCTTGATCATGATGTCAAGGGAAAATACAAGGTTGATCCAGCAATAGTTTCTCGCTTGTACCTAGACTGGATAATACCTCTAACAAAAGATGTTGAAGTCGAGTATTTACTACGTCGTCTCGACTGA 813 0.385 MMLRFLLVVVMLISCTDTYKMVKGDEYTLESVRASLIRQEDTIVFNVIERARFPLNSPTYDQHYASIPNFSGSLFDFILNQTEDIQAKMGRYINPEENSYEENLPVSLVPHYNFSQFLHPTAASVNINKSIRKVYFHEMLPLFVTSKDDGNYAQTATSDLSLLQAISRRIHYGKFVAEAKFKESPHDYEPLIRAKDKKSLMKLLTVKSVEDIVVKRVEKKAMVFGQKVSLDHDVKGKYKVDPAIVSRLYLDWIIPLTKDVEVEYLLRRLD 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00711 270 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Tsu07g00711 270 ProSiteProfiles Chorismate mutase domain profile. 20 270 IPR008238 GO:0004106|GO:0009073
Tsu07g00711 270 SUPERFAMILY Chorismate mutase II 26 270 IPR036263 GO:0046417
Tsu07g00711 270 PIRSF Chor_mut_AroQ_eu 16 270 IPR008238 GO:0004106|GO:0009073
Tsu07g00711 270 TIGRFAM CM_pl-yst: chorismate mutase 28 270 IPR008238 GO:0004106|GO:0009073
Tsu07g00711 270 PANTHER CHORISMATE MUTASE 1 270 IPR008238 GO:0004106|GO:0009073
Tsu07g00711 270 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 21 270 IPR037039 GO:0004106|GO:0009073
Tsu07g00711 270 PANTHER CHORISMATE MUTASE 1 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00711 Tsu-Chr7 5831513 5836337 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00711 K01850 - gmx:100791095 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00711 07 5831513 5836337 Tsu07g00711 07 5831513 5836337 ECH