Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00706 ATGGCGTTTGATGAAAAAGTGCTGGAAAATCAACTTATTGAAGCTGGTGACGAGCTTGCAGATCCTCCGTCTTCGGTGGATGAACTCCTCAAACTGCTCAATCGAGTTGAGAGCTTGTTATCAAGGGTGGAACAGGCACCTAAAGAATCTATGCAAGCTGCACTTTCTCCATCATTGAAAGCATTGGTGGCAGATAAACTTTTAAGGCATTCGGATCCGGATGTAAAAGTTGCACTTGCCTCTTGCATCAGTGAAATAACAAGAATATCTGCACCTGAAGCTCCTTATGATGATGATCAAATGAAGGAGATATTCCAATTAGTTGTAGCTTCATTTGAAAATCTACATGATAAGTCAAGCCGATCGTTTGCGAAGAGAAAAGCTATTCTTGAAACTGTTGCAAAGGTCAGATCATGCGTGGTAATGCTGGACCTTGAATGTGATGCGCTGATTTTGGAGATGTTTCAGCATTTTTTGAAGGCCATAAGGGAACATCATCCGGAGAATGTTTTTTCTTCAATGGAAACCATTATGACACTTGTCATAGAGGAAAGTGAAGATATATCATTTGATTTGCTTTCTCCACTCCTGGACAGCATTAAGAAAGACAATAAGGAAGTTTTACCGATTGCCCAGAAGTTGGCAGAGAGGGTGCTAAAAAATTGTGCAACCAAACTTAAGCCCAACTTAGTGCAAGCAGTGAGAACCTTAGGTATATCTGTGGATGATTACAGTGAAGTACTTGCTTCAATATGCCAAGATACATCTGATAGCTTGGAGAAAAATGGTGTATGTGTTACTGCTGAGCACAAGGAAGACAAGGGCAAGTCAGCAAAACTATCACTTGAGGAGTCAACACAAGTGGTTAAAGAGGAAGTTAAGAAAGCTGCACATTTGCCGCAAGATAATCGAGATGGGAATAGATCTTCCAAGTCAGTCACAAACAATGGCGTTGCACGTGTTGGAGAAGATGGCACTTTTGCAGATTCGAAGTCCATTAAAAAGAATGAGGAGCTCAATGATTTGGATGatgcaaaaattaaaaagaatgaacAAAAACCGGAACCAGCCACCAAGAAGAGCAGGAGGAAATCAAGCTATTCGACCAAATCAGAATGTCAAATTGTTGCTAatgaaagagaagatgaaaagaTGAAGGATTCTGAAAGTCACAGCAAGGACCAGGGAAGAAATGATGAAGTGATTCAAGCTAAGACTTCATTACCAAAAGCATGCAATGATGAATCTGAAGTTGTGGCTTCTGCTTCACCTAGTGACAGCCTCCCTGACGAAAATCATTCAGAGAaacatggaaaagaaaaaactaaagaTAGCCCTGCAAATGTCGAGACTGCAGAGGTTGTTTCAAAAAAGGCATCCGAAGGAGCAAGTATATCAAAACCCAAACTTGTGAAGCAGTCAGTGAAAAAGTCGCCTGGTCCGAACTCGGGTGTAAAAAAAGCTGCTGGTACAGATTCAGGCAAAAAACAAAGTGGGGCTGCTAATGGTGCTGATGCAAAAAAGCAGTCAGTCAAGAAATTGGATGATAATGAGGGTGGTGGTGGATCCTCTTCAAGGCAGCTGGTAGATAAGAAAAGGCGGGGAGAAGCTAACTCAGGAACAGGTCCAGCAAAATCTTATGCATTAGATGTTAATAAGGAAATGGTTTCTTCTCCAAGGTCTGATACCAAATCCTCTGAAGATGAAAAGTTAGAGGAGACTACCAAGACAAGTGCAAAGAGGAAACGCTCCTCAGGAAGAAAAAATGAGTCTGTGATCAAGGAATATGATCAAAACCTTGTTGGTGAACGAGTTGAAGTATGGTGGCCTAAGGATCGTGAGTTTTACAAAGGTGTCATTGAATCTTTTGATTCTGCCAAAAAGAAGCACAAGGTGATTTGGCCGTTTATTAAGTCATTCCTTTACCCTCTCCTCTCTGTTTCTAGAAAAAGCTTTCTGTTCTCTATGGTCTCATTGTATAGATTCTTATTATTTCTTCCCCTTTGA 2007 0.3991 MAFDEKVLENQLIEAGDELADPPSSVDELLKLLNRVESLLSRVEQAPKESMQAALSPSLKALVADKLLRHSDPDVKVALASCISEITRISAPEAPYDDDQMKEIFQLVVASFENLHDKSSRSFAKRKAILETVAKVRSCVVMLDLECDALILEMFQHFLKAIREHHPENVFSSMETIMTLVIEESEDISFDLLSPLLDSIKKDNKEVLPIAQKLAERVLKNCATKLKPNLVQAVRTLGISVDDYSEVLASICQDTSDSLEKNGVCVTAEHKEDKGKSAKLSLEESTQVVKEEVKKAAHLPQDNRDGNRSSKSVTNNGVARVGEDGTFADSKSIKKNEELNDLDDAKIKKNEQKPEPATKKSRRKSSYSTKSECQIVANEREDEKMKDSESHSKDQGRNDEVIQAKTSLPKACNDESEVVASASPSDSLPDENHSEKHGKEKTKDSPANVETAEVVSKKASEGASISKPKLVKQSVKKSPGPNSGVKKAAGTDSGKKQSGAANGADAKKQSVKKLDDNEGGGGSSSRQLVDKKRRGEANSGTGPAKSYALDVNKEMVSSPRSDTKSSEDEKLEETTKTSAKRKRSSGRKNESVIKEYDQNLVGERVEVWWPKDREFYKGVIESFDSAKKKHKVIWPFIKSFLYPLLSVSRKSFLFSMVSLYRFLLFLPL 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00706 668 MobiDBLite consensus disorder prediction 295 589 - -
Tsu07g00706 668 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 5 633 IPR039776 GO:0007064
Tsu07g00706 668 MobiDBLite consensus disorder prediction 560 589 - -
Tsu07g00706 668 PANTHER TRANSCRIPTIONAL REGULATOR 5 633 - -
Tsu07g00706 668 MobiDBLite consensus disorder prediction 429 447 - -
Tsu07g00706 668 Gene3D - 598 635 - -
Tsu07g00706 668 MobiDBLite consensus disorder prediction 375 400 - -
Tsu07g00706 668 Coils Coil 26 46 - -
Tsu07g00706 668 Pfam Sister chromatid cohesion protein PDS5 protein 27 231 - -
Tsu07g00706 668 SUPERFAMILY ARM repeat 43 243 IPR016024 -
Tsu07g00706 668 MobiDBLite consensus disorder prediction 327 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00706 Tsu-Chr7 5749964 5754858 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00706 - - gmx:100809147 771.926