Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00705 ATGGCTCTCGGTTTCTTCGCTCTCGCTATTTTCCTCTTCATCACTCTCGATCCTGATGTTTCTCCTTCTTCAACTGCTTCTGCTTCCGCTGCTTCATCAGAAGGCGTCGAGGTGAAGATTACTTATGGTTCGGTTATAAAGCTTATGCATGAGAAGACGAAATTTAGGTTACATTCTCATGATGTGCCTTATGGTTCTGGAAGTGGACAACAATCGGTTACTGGTTTTCCTACTGTTGATGATTCCAATAGTTACTggATTGTCAGGCCTGAGCCAGGAACTTCTGCTAAACAAGGTGACACTATTAAAAGTGGCACAATCATCAGATTACAGCACATGAGGACCAGGAAGTGGCTGCACAGCCATTTGCATGCTTCCCCAATTTCTGGCAATCTCGagGTCAGTTGCTTTGGTGGAGAGAATGATTCTGACACGGGGGACTATTGGAGgcTTTTAATAGAAGGAAGTGGAAAGACTTGGAAGCAGGATCAGAGGATTCGGCTTCAACATATTGACACTTCAGGCTATTTACATAGTCATGATAAGAAATACAGTCGGATAGCTGGGGGACAGCAGGAGgTTTGTGGTGTTCGTGAAAAGCGTGCTGAAAATATTTGGTTGGCAGCTGAAGGTGTCTACCTTCCTGTTAATGAAGGCAAACAAGCTGAGTAG 672 0.4375 MALGFFALAIFLFITLDPDVSPSSTASASAASSEGVEVKITYGSVIKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPTVDDSNSYWIVRPEPGTSAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEVSCFGGENDSDTGDYWRLLIEGSGKTWKQDQRIRLQHIDTSGYLHSHDKKYSRIAGGQQEVCGVREKRAENIWLAAEGVYLPVNEGKQAE 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00705 223 ProSiteProfiles MIR domain profile. 157 211 IPR016093 -
Tsu07g00705 223 Pfam MIR domain 72 203 IPR016093 -
Tsu07g00705 223 ProSiteProfiles MIR domain profile. 37 91 IPR016093 -
Tsu07g00705 223 PANTHER MIR MOTIF, GLYCOSYLTRANSFERASE 39-LIKE PROTEIN-RELATED 1 220 - -
Tsu07g00705 223 ProSiteProfiles MIR domain profile. 99 154 IPR016093 -
Tsu07g00705 223 Gene3D - 23 221 - -
Tsu07g00705 223 SMART mir_2 157 211 IPR016093 -
Tsu07g00705 223 SMART mir_2 99 154 IPR016093 -
Tsu07g00705 223 SMART mir_2 37 91 IPR016093 -
Tsu07g00705 223 PANTHER STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN 1 220 - -
Tsu07g00705 223 SUPERFAMILY MIR domain 38 211 IPR036300 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00705 - - mtr:MTR_3g106130 400.979