Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00686 atGTACTGGGTTGCAAAAGCATCTGAATACCTTGTGATAACCGGAGTCGGAATCAAAGACATAAAGCTTGCAAAAAAAGCATGGGTTCTCCCCGGTCAATCCTGCACCGTTTTCGACCTCTCACCGGTAAACTACACCTTCGAAGTTCAGGCAATGAGTGCCGAAAAACTCCCTTTCGTTCTCCCTGCCGTTTTCACAATCGGTCCTCGTGTTGATGATCATGAAAGTCTCCTAAAATACGCCAAATTAATCACACCACATGATAAACTCTCCCATCATGTTAAAGAACTTGTTCAAGGAATTATCGAAGGCGAGACACGTGTGCTCGCTGCTTCGATGACGATGGAAGAGGTTTTCAGAGGAACAAAAGAGTTTAAACAAGAAGTATTCGAGAAAGTTCAACTCGAACTAAACCAATTTGGTTTATTGATATACAATGCGAATGTTAAACAATTGGTCGATGTTCCCGGTCATGAGTATTTCTCATATTTGGGACAAAAGACACAAATGGAAGCGGCGAATCAAGCTAGAGTTGATGTGGCAGAAGCTAGGATGAAAGGTGAAATTGGTTCAAAATTGAGAGAAGGACAAACACTGCAAAATGCAGCGAAAATTGATGCAGAGACGAAGGTTATTGCGATGCAGAGGGCTGGAGAGGGTGATAAGGAGGGAATTAAAGTGAGGACTGCAGTGAAAGTTTTTGAGAATCAGAGAGAGGCTGAAGTGGCTGAGGCTAATTCTGAGTTGGCTAAGAAAAAAGCGGCTTGGACCAAGGCGGCTCAAGTGGCTGAAGTTGAGGCTGCTAAAGCCGTGGCTCTTCGGGAAGCCGAGTTGCAAGGTGAGGTTGAGAGAATGAATGCTTTGACTACTACTGAGAAGCTTAAAGCTGAGTTTCTTAGCAAAGCTAGTGTCGAATATGAAACCAAGGTACAAGAAGCAAATTGGGACCTATACAAGAAACAAAAGGATGCAGAAGCAATTCTGTATGAGAAGAAGGCAGAGGCAGAAGCACAGATAGCATTGGCAGATGCAACATTTTATGCTCGTAAACAAGCTGCTGAAGCAGAGTTATATGCAAAGACAAAAGAGGCAGAGGGGATTGTGACACTTGGGAATGCTCAAGGTGTGTATGTAAGTACAATTCTCAATGCACTTGGAGGAAACTATTATGCTCTAAGAGACTATTTGATGATAAATGGTGGCATGTATCAAGAAATTGCAAAGATTAATGCTGAAGCAATACGTGGACTTGAACCTAAGATTAGTATTTGGAGTAATGGTGGTGATAATGGTGGAAAATTAAGTGAAGATGCCATGGGTATGAAAGAGGTTGCTGGTGTGTACAAAATGTTGCCACCTCTGTTTAAGACTGTCCATGAACAAACTGGCATGTTGCCTCCTGCTTGGATGGGAACATTATCAGACAAAAGCTCTTAA 1437 0.4252 MYWVAKASEYLVITGVGIKDIKLAKKAWVLPGQSCTVFDLSPVNYTFEVQAMSAEKLPFVLPAVFTIGPRVDDHESLLKYAKLITPHDKLSHHVKELVQGIIEGETRVLAASMTMEEVFRGTKEFKQEVFEKVQLELNQFGLLIYNANVKQLVDVPGHEYFSYLGQKTQMEAANQARVDVAEARMKGEIGSKLREGQTLQNAAKIDAETKVIAMQRAGEGDKEGIKVRTAVKVFENQREAEVAEANSELAKKKAAWTKAAQVAEVEAAKAVALREAELQGEVERMNALTTTEKLKAEFLSKASVEYETKVQEANWDLYKKQKDAEAILYEKKAEAEAQIALADATFYARKQAAEAELYAKTKEAEGIVTLGNAQGVYVSTILNALGGNYYALRDYLMINGGMYQEIAKINAEAIRGLEPKISIWSNGGDNGGKLSEDAMGMKEVAGVYKMLPPLFKTVHEQTGMLPPAWMGTLSDKSS 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00686 478 Pfam SPFH domain / Band 7 family 22 183 IPR001107 -
Tsu07g00686 478 PANTHER FLOTILLIN-RELATED 1 474 IPR027705 -
Tsu07g00686 478 PANTHER FLOTILLIN-LIKE PROTEIN 6 ISOFORM X1 1 474 - -
Tsu07g00686 478 SUPERFAMILY Band 7/SPFH domain 33 172 IPR036013 -
Tsu07g00686 478 Gene3D Band 7 domain 38 155 IPR036013 -
Tsu07g00686 478 CDD SPFH_flotillin 28 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00686 Tsu-Chr7 5493467 5495360 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00686 K07192 - dcr:108226889 759.985