Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00669 ATGAAGCACACTTCATCCGAAGCAGTTCCATCTCTATCATCCGTACCATCATTCACGGACCAATCACAACCCGCCACGTCAtcgtcttcttcatcatcttcttccgcCGCAGCGGCGGAAGACCTTACAACAGGCTCTCGCGACGGAGGTAGCGCTCAAGAAGCGGTTATTGTGGATCGGAGAGGAGAGTACTCCGCTGTATGTAGATGGACGGTTAAGAATTTTCCGAAAGTAAAAGCTAGGTCACTGTGGAGTAAGTATTTTGAGGTAGGTGGTTACGATTGTCGTCTATTGATATACCCTAAAGGTGATTCACAAGCTTTACCTGGTTATGTTTCTGTTTATCTTCAAATCATGGACCCTCGTGGAACTTCTTCTTCAAAATGGGAATGTTTTGCTAGTTATCGTTTAGCTTTTCATAATGTTGTTGATGATTCTAAAACTATTCATCGTGATTCTTGGCATAGGTTTTCTGCTAagaagaaatcacatggttggTGTGATTTCACACCTGCTTCTACTATTTTTGATCCTAAATTGggttttttgtttaataatgaTTCTGTATTGGTAACTGCTGATATTCTTATTCTTAATGAGTCTGTTAATTTCACTCGCGATAACAATGAGTTGTTGTCTTCGTCGTTGTCTAATTCGAATTCGATATCTTCTTCGGTTGTTGTGGCTCCTGTTTCTGATGTTTTGAGTGGGAAGTTTACGTGGAAAGTTCATAATTTTAGTTTGTTTAAGGACATGATTAAGACACAGAAGATAATGAGTCCGGTTTTTCCTGCTGGGGAGTGTAATTTGAGGATTAGTGTTTATCAGAGTTCGGTTAATGGGGTTGAGTATCTTTCCATGTGTTTGGAAAGTAAGGATACGGATAAGAATGTGGTTTTGTCAGATAGAAGTTGCTGGTGTTTGTTTAGAATGTCTGTTTTGAATCAGAAGCCTGGTTCGAATCATATGCATAGGGATTCTTATGGTCGGTTTGCGGCTGATAATAAGAGTGGTGATAATACTAGCTTGGGTTGGAATGATTATATGAAGATGTCTGATTTCGTTGGGTCGGATTCGGGGTTTGTGGTGGATGACACCGCGGTTTTTAGTACCTCGTTTCATGTGATCAAGGAATTTAGTAGCTTCTCTAAGAATGGGGCTGTCATTGGTGGGAGAAGTGGAAGCGGTGCGAGGAAGTCAGATGGCCACATTGGAAAGTTCACTTGGAGGATCGAGAATTTCACAAGGTTGAAGGATTTACTAAAGAAGAGGAAAATTACGGGTCTTTGCATTAAGAGCAGGAGGTTTCAGATTGGTAATAGGGATTGCCGTCTTATTGTTTATCCCCGAGGGCAGTCTCAGCCACCATGCCACCTTTCGGTGTTTCTCGAAGTTACGGATTCAAGAAATACTTCTAGTGATTGGAGTTGTTTTGTTAGTCATCGGTTGTCGGTTGTAAACCAGAAGATGGAGGACAAATCTGTCACCAAGGAATCTCAGAACCGCTACTCTAAAGCTGCAAAGGATTGGGGCTGGCGTGAATTTGTGACACTCACTAGTCTATTTGATCAAGACTCAGGTTTTCTTGTCCAGGACACTGTCATTTTCTCAGCTGAAGTTCTCATATTGAAAGAGACATCAATAATGCAGGACTTCACTGAGCATGTTTCTGAGTTAAACGGCAGCAGTTCCCTTCTTGATAGTAGTGGGAAAAGAAGCTCATTTACATGGAAAGTGGAGAATTTCCTTTCTTTTAAGGAAATAATGGAGACTCGAAAAATCTTCAGTAAATTCTTTCAGGCTGGTGGATGTGAACTTCGAATTGGTGTATATGAGTCATTTGATACGATATGCATTTATTTGGAGAGTGACCAGGCTGTTGGTTGCGATCCTGATAAAAACTTCTGGGTCAGATACCGAATGGCTGTTGTGAATCAAAAAAACCCAGCCAAGACTGTATGGAAAGAATCTTCTATCTGCACAAAAACTTGGAATAATTCTGTTTTGCAATTCATGAAGGTGTCCGATATGTTAGAAGCAGATGCAGGGTTTCTTTCCCGTGACACTGttgtttttgtgtgtgaaaTATTGGATTGCTGCCCTTGGTTTGACTTTTCAGACTTAGAGGTTTTTGCTTCGGAGGATGATCAGGATGCATTGACAACTGATCCTGATGAACTGATAGACTCTGAAGACAGTGAAGGGTTAAGTGGAGATGAGGAAGATATTTTTAGAAATCTTCTTTCCAGAGCTGGATTTCATTTAACTTATGGAGATAATCCTTCACAGCCACAGGTTACTTTAAGAGAGAAACTTTTAATGGATGCTGGTGCAATTGCTGGGTTTTTGACTGGACTTCGGGTTTATCTTGATGATCCTGCAAAAGTAAAGCGCTTGCTTCTGCCTACGAAGCTCTCTGGTATTTCTGATGGGAAGAAGGCCACCAAGGCTGACGAGTCTTCCCCAAGTTTGATGAATTTGCTGATGGGAGTTAAAGTCTTACAGCAAGCAATCATTGATTTACTATTGGATATAATGGTTGAGTGCTGCCAGCCTTCTGAAGGGGGTCCTGTTGTTGATTCTGTTGATGAATGCTCTAAGCTTTCTCCAGATAGTAGTGGAAACATTAGTCCACTTGAACGTGATAATGAAAATAGAGCAGTGGAGTCTGCACAAGTTCTTGTTCATGATAGATTGAATTCTGTTGTCGAAGAAAGCAGTAGTACGTCTTCTGCACAGAGCTTTGATTTAAATGGGAATGGTATTCAGGAAAAAGCTCTTCCTGGACAGCCCACTTGTCCACCGGAAACAGGTGCCACTGTTTCAGAAAATGCGTCATTTCGGTCAAAGACCAAGTGGCCAGAGCAGTCTGAGGAGCTCTTAGGTTTGATTGTAAATTCACTAAGAGCTTTGGATGGGGCCGTTCCACAAGGTTGTCCGGAGCCAAGACGGCGACCTCAGTCAGCACAGAAAATTGCTCTCGTATTGGACAAGGCTCCTAAGCATTTGCAAGCAGACCTGGTTGCTTTGGTACCCAAATTGGTTGAGCAGTCAGAACACCCACTGGCTGCACATGCACTCCTTGAGCGCCTACAACAGCCAGATGCTGAACCTGCTTTACGAATACCTGTTTTTGGAGCGCTTAGTCAATTGGAGTGTGGTAGTGAAGTGTGGGAGCGCATTCTGTTTCAGTCATTTGCACTTTTGACGGATTCAAATGACGAACCTCTAGTTGCAACAATAGATTTTATATTCAAAGCGGCATCTCAATGCCAACATCTCCCTGAAGCAGTTAGGTCTGTTCGTGTCAGGCTGAAAAATTTAGGTCTTGATGTGTCGCCTTTTGTCCTCGACTTTTTGAGCAAGACTATAAATAGTTGGGGGGATGTTGCTGAAACCATATTGAGGGACATTGATTGTGATGAGGATTATGGTGAAAGTTGCACGGCTCTGCCATGTGGGATTTTCTTATTTGGTGAACATAGCGCTGCTGCTACTGGATTGCACATGATTGACGAGCAAGCTTTTCGTGCTAGTCGTCATTTTTCTGATATTTATATACTGTTAGAAATGTTATCTATACCTTGTCTTGCTGTTGAAGCTTCTCAAACTTTTGAGAGAGCTGTAGCTCGAGGTGCAATAACTGCTCAGTCTGTAGCTCTTGTATTGGAAAGTCTTCTTTCCCAAAGATTGAACAATAATGTCAGAACTGAAAATTTTCAACATTTAGATGGTGCAACAGAGGAAGATGCCTGTGAGCAATTGGTTCAAAGGGATGATTTTACATCAATTCTTGGTCTTGCTGAAACTTTGGCCCTCTCCAGGGACCTATGTGTGCAAGAATTTGTGAAATTGCTCTACATGATAATCTTTAGATGGTATGCTAACGAATCTTATCGGGGGAGGATGCTGAAGAGGCTTGTTGACCGCGCCACCAGCACTACTGATAATGGCCGTGGAGTAGATTTTGATTTGGATATCTTGGTTACTTTGGTCTGTGAGGAACAGGAGTATATTAGGCCTGTTTTGAGTATGATTCGTGGAGTTGCTGAACTTGCAAATGTTGATCGAGCTGCTCTGTGGCACCAGTTATGTGCTAGTGAAGATGAAATTATCCGTGTTCGTGAAGAATGCAAAACTGAAATTTCTAATATGACTAAGGAAAAAGCTACGTTATCACAAAAGCTGAGTGAATCCGAGGCCACAAACAGTCGACTCAAGTCTGAAATGAAGGCCGAGATAGATCGGTTTTCTCGGGAAAAGAAGGAACTCACAGAACAAATTCAAGAAGTTGAGAGTCAGCTTGAATGGCATCGCTCAGAGCGGGATGATGAAATATTAAAGCTCTCTGCAGAGAAGAAAGTTCTTCATGATCGTTTGCATGATGCAGAGACACAACTTTCTCAGTTGAAGTCTCGGAAACGTGATGAATTAAAGAAAATAGTCAAGGAGAAAAATGCACTTACTGAAAGATTGAAAAATGCTGAAGCTGCACGCAAGAGATTTGATGAAGAATTGAAAAGATTTGCAACAGAAAACGTATCTCGGGAAGAAATCCGGCAATCGCTTGAGGATGAAGTTCGTAGACTGACTCAAACAGTTGGACAAACCGAGGGAGAAAAGCGGGAAAAGGAGGAGCAGGTTGCTAGGTGTGAAGCATATATTGATGGCATGGAATCAAAGTTGCAGGCCTGCCAGCAATATATCCACACCCTTGAGGCCTCACTCCAGGAGGAAATGTCACGACATGCCCCATTATATGGTGCTGGTTTGGAGGCTCTATCAATGAAAGAGTTGGAAACAATATCACGTATTCATGAAGAGGGCCTGAGACAGATCCACGCCCTTCAACAGCGTAAAGGGAGTCCAGCTGGGAGTCCTCTTTTGAGTCCCCATGCTCTCCCTCACAGCCATGGATTATATCCTTCTGCGTCTGTGGGACTTCCTCCCTCAATCATCCCAAATGGCGTAGAAGTGTTGGAGCAAGCAAGGATGTTGGGTAAAAAGGAGTACCTAAGGTTAGAAGGGTTGGGTGAAATTTTGCAAATGCCATACTCATTTGCGCCTACATTTTGA 5076 0.4186 MKHTSSEAVPSLSSVPSFTDQSQPATSSSSSSSSSAAAAEDLTTGSRDGGSAQEAVIVDRRGEYSAVCRWTVKNFPKVKARSLWSKYFEVGGYDCRLLIYPKGDSQALPGYVSVYLQIMDPRGTSSSKWECFASYRLAFHNVVDDSKTIHRDSWHRFSAKKKSHGWCDFTPASTIFDPKLGFLFNNDSVLVTADILILNESVNFTRDNNELLSSSLSNSNSISSSVVVAPVSDVLSGKFTWKVHNFSLFKDMIKTQKIMSPVFPAGECNLRISVYQSSVNGVEYLSMCLESKDTDKNVVLSDRSCWCLFRMSVLNQKPGSNHMHRDSYGRFAADNKSGDNTSLGWNDYMKMSDFVGSDSGFVVDDTAVFSTSFHVIKEFSSFSKNGAVIGGRSGSGARKSDGHIGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSIMQDFTEHVSELNGSSSLLDSSGKRSSFTWKVENFLSFKEIMETRKIFSKFFQAGGCELRIGVYESFDTICIYLESDQAVGCDPDKNFWVRYRMAVVNQKNPAKTVWKESSICTKTWNNSVLQFMKVSDMLEADAGFLSRDTVVFVCEILDCCPWFDFSDLEVFASEDDQDALTTDPDELIDSEDSEGLSGDEEDIFRNLLSRAGFHLTYGDNPSQPQVTLREKLLMDAGAIAGFLTGLRVYLDDPAKVKRLLLPTKLSGISDGKKATKADESSPSLMNLLMGVKVLQQAIIDLLLDIMVECCQPSEGGPVVDSVDECSKLSPDSSGNISPLERDNENRAVESAQVLVHDRLNSVVEESSSTSSAQSFDLNGNGIQEKALPGQPTCPPETGATVSENASFRSKTKWPEQSEELLGLIVNSLRALDGAVPQGCPEPRRRPQSAQKIALVLDKAPKHLQADLVALVPKLVEQSEHPLAAHALLERLQQPDAEPALRIPVFGALSQLECGSEVWERILFQSFALLTDSNDEPLVATIDFIFKAASQCQHLPEAVRSVRVRLKNLGLDVSPFVLDFLSKTINSWGDVAETILRDIDCDEDYGESCTALPCGIFLFGEHSAAATGLHMIDEQAFRASRHFSDIYILLEMLSIPCLAVEASQTFERAVARGAITAQSVALVLESLLSQRLNNNVRTENFQHLDGATEEDACEQLVQRDDFTSILGLAETLALSRDLCVQEFVKLLYMIIFRWYANESYRGRMLKRLVDRATSTTDNGRGVDFDLDILVTLVCEEQEYIRPVLSMIRGVAELANVDRAALWHQLCASEDEIIRVREECKTEISNMTKEKATLSQKLSESEATNSRLKSEMKAEIDRFSREKKELTEQIQEVESQLEWHRSERDDEILKLSAEKKVLHDRLHDAETQLSQLKSRKRDELKKIVKEKNALTERLKNAEAARKRFDEELKRFATENVSREEIRQSLEDEVRRLTQTVGQTEGEKREKEEQVARCEAYIDGMESKLQACQQYIHTLEASLQEEMSRHAPLYGAGLEALSMKELETISRIHEEGLRQIHALQQRKGSPAGSPLLSPHALPHSHGLYPSASVGLPPSIIPNGVEVLEQARMLGKKEYLRLEGLGEILQMPYSFAPTF 1691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00669 1691 SUPERFAMILY TRAF domain-like 573 697 - -
Tsu07g00669 1691 CDD MATH 69 195 IPR002083 GO:0005515
Tsu07g00669 1691 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 232 379 IPR008974 GO:0005515
Tsu07g00669 1691 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 562 698 IPR008974 GO:0005515
Tsu07g00669 1691 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 396 549 IPR008974 GO:0005515
Tsu07g00669 1691 CDD MATH 574 696 IPR002083 GO:0005515
Tsu07g00669 1691 SUPERFAMILY TRAF domain-like 405 546 - -
Tsu07g00669 1691 Coils Coil 1375 1441 - -
Tsu07g00669 1691 MobiDBLite consensus disorder prediction 905 920 - -
Tsu07g00669 1691 Gene3D - 1437 1629 - -
Tsu07g00669 1691 PANTHER TRAF-LIKE FAMILY PROTEIN 34 1666 - -
Tsu07g00669 1691 ProSiteProfiles MATH/TRAF domain profile. 572 696 IPR002083 GO:0005515
Tsu07g00669 1691 SUPERFAMILY TRAF domain-like 64 203 - -
Tsu07g00669 1691 ProSiteProfiles MATH/TRAF domain profile. 404 540 IPR002083 GO:0005515
Tsu07g00669 1691 SUPERFAMILY TRAF domain-like 234 379 - -
Tsu07g00669 1691 Pfam MATH domain 436 542 IPR002083 GO:0005515
Tsu07g00669 1691 Pfam MATH domain 72 197 IPR002083 GO:0005515
Tsu07g00669 1691 Pfam MATH domain 585 691 IPR002083 GO:0005515
Tsu07g00669 1691 ProSiteProfiles MATH/TRAF domain profile. 65 195 IPR002083 GO:0005515
Tsu07g00669 1691 CDD MATH 405 540 IPR002083 GO:0005515
Tsu07g00669 1691 MobiDBLite consensus disorder prediction 861 882 - -
Tsu07g00669 1691 SMART math_3 241 354 IPR002083 GO:0005515
Tsu07g00669 1691 SMART math_3 67 175 IPR002083 GO:0005515
Tsu07g00669 1691 SMART math_3 577 677 IPR002083 GO:0005515
Tsu07g00669 1691 SMART math_3 409 521 IPR002083 GO:0005515
Tsu07g00669 1691 Coils Coil 1520 1547 - -
Tsu07g00669 1691 Coils Coil 1446 1512 - -
Tsu07g00669 1691 MobiDBLite consensus disorder prediction 1 50 - -
Tsu07g00669 1691 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 63 210 IPR008974 GO:0005515
Tsu07g00669 1691 MobiDBLite consensus disorder prediction 905 952 - -
Tsu07g00669 1691 MobiDBLite consensus disorder prediction 935 951 - -
Tsu07g00669 1691 MobiDBLite consensus disorder prediction 866 880 - -
Tsu07g00669 1691 ProSiteProfiles MATH/TRAF domain profile. 236 373 IPR002083 GO:0005515
Tsu07g00669 1691 MobiDBLite consensus disorder prediction 1 54 - -
Tsu07g00669 1691 PANTHER TRAF-LIKE FAMILY PROTEIN 34 1666 - -
Tsu07g00669 1691 CDD MATH 237 369 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00669 Tsu-Chr7 5333893 5343384 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00669 - - ccaj:109798115 2896.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00669 07 5333893 5343384 Tsu07g00669 07 5333893 5343384 ECH