Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00664 atGCAGAGACGAAGTCCTCCTAAGCATAGACACGATGGGACTTCGCCACTGCCTCTTGGCATGGATTGGAGTCCTGCACCGAGAAAATGGAATGGGCGGGATACCGAATGGCCACACAATCATCGTACCGGTTGGAGTTATTGCGTCATAATACCTTCTTGGGTTTTTGTACCAAAATCAAGGAACTCGGATCCTATAGTGTTCTACAGGCTTCAAGTTGGTATACAATCACCAGAAGGGATTACAAATATCCATGGAGTACTAAGAAGGTTCAATGATTTTCTAAACTTTTTTGTTGATCTTAAAAAGGAGTTTCCCAGGAAAAATATCCCTCCAGCTCCACCCAAGGGACTCTTACGATTGAAAAGCCGAGCTTTGTTGGAAGAGAGAAGGCGCTCTTTGGAGGAGTGGATCACCAAACTATTGTCTGACATTGACATATCAAGATGTGCACCCGTGGCCTCATTTCTTGAGCTAGAAACTGCTGCTAGATCTTCATTTCAAGATGCAAGCCAGCAGAATTCAGTAAAAGATCCTGATTCCAATAATAGAGATTATTCGGTGCAATCGCCTCTCCATTCGAGCTTATCATTAGCTGCTGGTAGTTCATCTGTTGCGTCAGATTATGGTAGTGATACTCCATATGATGCATCGGAAGTAGGAACTCCTAGAATTGGACGGGATGATAATTCTGAAGTTGGGACAGATGACCTGACACCAGATGAAGATACGACAAATCCAATAGAAAAACTTGTAAAATATGGCATAACAAATATTGATGAGGGTTTGTTTATGGGTCAGACTATTCTAGAGCAATTAGAAGGACTTCCTAGGCATAAAGTAAATACCAGACATGTGAACAATGTTACGGGGAAGGACAGAAGTAATGGTAATTCATATGATTCTTCATTTCTAGCTAATAATACCATGGAGCTTTTCTCTGAGCCTGGGCATGCTAAAGTTTTTGGTCACATTCGTAAGCTTTCAAATGACAGTGTTGGAAGTGATGGAAGCTCAGTACGAGGTAGTGACATGTCTAATTTTGGGATTCCAAATTCATCTGGTAATGGCTCTGTCGACGTTCCTGGATATGCTTCGGTTTCAAGAGAAACAGATATTGTGGGCCACACAAAGTTGAAAAGTACTGGTGATGCTCAATTAGTCCTTCCGCTAGATCAACGCAATAAACTGAACAGGATTCTTTCAACCATGCAGAGAAGGCTAGTCACAGCAAAAACTGATATGGAGGACCTTGTAGTTAGATTAAATCAAGAAATAGCTGCAAAGGATTTTCTTACGACAAAGGTCAAGGATTTGGAAGTTGAACTAGAAActacaaaacagaaaaataaggAGAACTTGCAGCAAGCTATTCTGATTGAGAGGGAAAGATTTACCCAAATGCAGTGGGATATGGAGGAACTTAGACGAAAGTCGCTGGAAATGGAGATGAAACTTAAGTCTGAATCGGATGGAAATGTTGGTCAAAATTTGACAAAGGAATCAATTGTTCAGCAGAACGATGTGCTGGTACAGGATTTAGATGCTGCTAAAGAGCAGCTGGAAGTTTTGTCAAAACAGTATGGAGAGCTAGAAGCAAAATCCAAAGCAGATATTAAAGTTCTGGTTAAAGAGGTTAAATCTCTCCGTAGTTCCcaaaaagaattgaagaaggaaCTTAGCGAGTCCATAAAGGAGAAATGTGAAGCTGAGAAACTACTACTTCATGAAAGAGAGAAGAGGGAACGGGCAGaaactgattggagaaaacagCTTGAGAAATGCGGGGTTCTTTTTAAGCAGCTTCAAGAGTGCAATCTCAATCTTCCTTACGAAGATGATGATAGAATATTCTTgcattcatcatcattaaatgATGCTTTTAATCAATTAAAGACATCTGATGACCAAATTGACATCCTACTAGCAGAGGTTGAAAACTTAGATGAAGACTACAGAAGTGCAGCTTTTGACGTAGATAAAACCAATGACATAAAAGATGGTGTAATCTGTGGTGATGAGGTGAGAAAGATCATAGCAGATTTGTTCATTGATAATGTTAGATTGAGAAAACAGACAAACCGCGTTGCAAGACATGCTCTCAAATTGGATAGTACAACGAGTGTTGATTCTCCTTCAATTGAAAATGTAACAAATATTTAG 2163 0.3874 MQRRSPPKHRHDGTSPLPLGMDWSPAPRKWNGRDTEWPHNHRTGWSYCVIIPSWVFVPKSRNSDPIVFYRLQVGIQSPEGITNIHGVLRRFNDFLNFFVDLKKEFPRKNIPPAPPKGLLRLKSRALLEERRRSLEEWITKLLSDIDISRCAPVASFLELETAARSSFQDASQQNSVKDPDSNNRDYSVQSPLHSSLSLAAGSSSVASDYGSDTPYDASEVGTPRIGRDDNSEVGTDDLTPDEDTTNPIEKLVKYGITNIDEGLFMGQTILEQLEGLPRHKVNTRHVNNVTGKDRSNGNSYDSSFLANNTMELFSEPGHAKVFGHIRKLSNDSVGSDGSSVRGSDMSNFGIPNSSGNGSVDVPGYASVSRETDIVGHTKLKSTGDAQLVLPLDQRNKLNRILSTMQRRLVTAKTDMEDLVVRLNQEIAAKDFLTTKVKDLEVELETTKQKNKENLQQAILIERERFTQMQWDMEELRRKSLEMEMKLKSESDGNVGQNLTKESIVQQNDVLVQDLDAAKEQLEVLSKQYGELEAKSKADIKVLVKEVKSLRSSQKELKKELSESIKEKCEAEKLLLHEREKRERAETDWRKQLEKCGVLFKQLQECNLNLPYEDDDRIFLHSSSLNDAFNQLKTSDDQIDILLAEVENLDEDYRSAAFDVDKTNDIKDGVICGDEVRKIIADLFIDNVRLRKQTNRVARHALKLDSTTSVDSPSIENVTNI 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00664 720 Coils Coil 539 566 - -
Tsu07g00664 720 ProSiteProfiles PX domain profile. 47 164 IPR001683 GO:0035091
Tsu07g00664 720 MobiDBLite consensus disorder prediction 1 25 - -
Tsu07g00664 720 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 710 IPR044588 GO:0015031
Tsu07g00664 720 Gene3D - 53 186 IPR036871 GO:0035091
Tsu07g00664 720 Coils Coil 429 456 - -
Tsu07g00664 720 SMART PX_2 43 160 IPR001683 GO:0035091
Tsu07g00664 720 Coils Coil 500 534 - -
Tsu07g00664 720 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 710 - -
Tsu07g00664 720 MobiDBLite consensus disorder prediction 167 211 - -
Tsu07g00664 720 SUPERFAMILY PX domain 40 160 IPR036871 GO:0035091
Tsu07g00664 720 Coils Coil 631 651 - -
Tsu07g00664 720 Pfam PX domain 86 158 IPR001683 GO:0035091
Tsu07g00664 720 MobiDBLite consensus disorder prediction 167 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00664 Tsu-Chr7 5278384 5285208 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00664 - - gmx:100792151 1132.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00664 07 5278384 5285208 Tsu07g00664 07 5278384 5285208 ECH