Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00658 ATGTCATATTCACGTGGTTATGTTCACGCGTGTGTTTCGGCTGTGTCTAAGCGTTTGGGGAAAACGCGCGATTGGATTGTGGCGTTGAAGGCTCTTATACTTGTTCATCGTTTGATGAATGAAGGAACACCGATCTTTCAGGAAGAGATCATGTATGCTACCCGTAGGGGAACGAGGCTTTTGAATATGTCTGATTTTAGAGATGAGGCTCATTCTAGTTCTTGGGATCACTCTGCTTTTGTTAGGACTTATGCGATGTATCTTGATCAGCGACTTGAGTTGATGTTGTTTGATAGAAAGGCTGGTAGTGTTGGTGGTGCTGGCAGTGGTGGCGGTGGGGATGAGAGGTTTGGTGGAAGAGAAAATTACAGGTCGCCACCGAATGAATATGAGTATGGAGGTGGACAATATAGAGGGGAAGGTGGGATGAGGAAGACGAGGTCGTATGGTGATGTGAACGAAGTGTCGGGGAATGATGATAGAAGGATTGTTACTGTTACCCCTTTGAGGGATATGAAGCCGGAGAGGATTTTCGGCAAGATGAGTCATTTGCAGAGGCTTTTAGATCGTTTCTTGGCTTGTAGGCCAACTGGCTTGGCCAAGAATAGCAGGATGGTTTTGATTGCCTTGTATCCCTTGGTTAAGGAGAGTTTTCAGTTGTATGCTGATATATGTGAGGTTTTGGCTGTGTTGCTTGATAAATTCTTTGATATGGAGTACCCTGATTGTGTGAAGGCCTTTGATGCTTATGCAAGTGCTGCTAAACAGATTGATGAACTGCTTGCCTTTTACAATTGGTGTAAAGATAGTGGCTTGGGGAGATCCTCTGAGTACCCAGAAGTTCAGAGGATTACTAGTAAGTTGTTGGAGACGCTAGAGGAGTTCGTGAGGGATAGGGCCAAGAAGCCAAAGAGTCCAGAGAGGAAAGAGGAAGCTCCCAAGCCGGAAGTACAAGAGGAGGAACCAGTACAGGATATGAACGAAATCAAGGCACTGCCTCCACCTGAGAATTATACCCCACCTCCTCCTCCGGAGCCGGAGCCTGCACCAAAGCCACAGTTTACGGAGGACTTGGTGAATCTGAGGGAGGATGCGGTCACTGCAGATGACCAGGGTAATAGATTTGCTTTGGCACTCTTTGCTGGTGCACCGGCTAATAATGGAAATGGATCATGGGAAGCCTTTCCATCAAATGGACAGCCAGAAGTAACTTCAGCTTGGCAAACCCCTGCCGCAGAACCTGGGAAAGCTGATTGGGAATTGGCATTGGTTGAAACAGCCAGCAATTTATCAAGGCAGAAGAATGCTTTAGGTGGTGGGCTTGATCCCCTATTGTTGAATGGTATGTACGACCAAGGAATGGTCAGGCAGCATGTTAGCACCTCCCAACTTACTGGAGGGAGTGCAAGCAGTGTGGCATTGCCAGGACTGGGAAAGACCACAACACCTGTTTTAGCTCTCCCAGCCCCAGATGGATCTGTGCAGCCAGTGAATCAGGACCCATTCGCTGCATCGTTGAACATTCCACCACCTTCCTATGTGCAAATGGCCGAAATGGAGAAGAAGCAGCAATTGCTTGTGCATGAGCAGCAGCTGTGGCACCAGTATGCAAGGGATGGCATGCAAGGCCAGTCTAGCTTGACCAAATTGAACAATGGTACTGGATACTATGCTGGAGGTCCTATGCCGTATGGAATGCCCCCAGTTCATGGAATGGGACCTCCAAACGGTATCATGGGATGCAAAGGAGAGACAATTGGAGGAAACAATTTCTTGTTGGGTTTTGATGCTGGGAGATGTGTAACTCAATTGTGA 1815 0.4766 MSYSRGYVHACVSAVSKRLGKTRDWIVALKALILVHRLMNEGTPIFQEEIMYATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYAMYLDQRLELMLFDRKAGSVGGAGSGGGGDERFGGRENYRSPPNEYEYGGGQYRGEGGMRKTRSYGDVNEVSGNDDRRIVTVTPLRDMKPERIFGKMSHLQRLLDRFLACRPTGLAKNSRMVLIALYPLVKESFQLYADICEVLAVLLDKFFDMEYPDCVKAFDAYASAAKQIDELLAFYNWCKDSGLGRSSEYPEVQRITSKLLETLEEFVRDRAKKPKSPERKEEAPKPEVQEEEPVQDMNEIKALPPPENYTPPPPPEPEPAPKPQFTEDLVNLREDAVTADDQGNRFALALFAGAPANNGNGSWEAFPSNGQPEVTSAWQTPAAEPGKADWELALVETASNLSRQKNALGGGLDPLLLNGMYDQGMVRQHVSTSQLTGGSASSVALPGLGKTTTPVLALPAPDGSVQPVNQDPFAASLNIPPPSYVQMAEMEKKQQLLVHEQQLWHQYARDGMQGQSSLTKLNNGTGYYAGGPMPYGMPPVHGMGPPNGIMGCKGETIGGNNFLLGFDAGRCVTQL 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00658 604 MobiDBLite consensus disorder prediction 104 137 - -
Tsu07g00658 604 Gene3D - 1 98 IPR008942 -
Tsu07g00658 604 MobiDBLite consensus disorder prediction 298 326 - -
Tsu07g00658 604 PANTHER CLATHRIN ASSEMBLY PROTEIN 2 561 IPR045192 GO:0048268|GO:0072583
Tsu07g00658 604 Pfam ANTH domain 3 298 IPR011417 GO:0005543
Tsu07g00658 604 ProSiteProfiles ENTH domain profile. 1 102 IPR013809 -
Tsu07g00658 604 PANTHER - 2 561 - -
Tsu07g00658 604 SUPERFAMILY GAT-like domain 168 298 - -
Tsu07g00658 604 MobiDBLite consensus disorder prediction 298 353 - -
Tsu07g00658 604 CDD ANTH_N_AP180_plant 1 94 - -
Tsu07g00658 604 SMART enth_2 1 102 IPR013809 -
Tsu07g00658 604 MobiDBLite consensus disorder prediction 334 351 - -
Tsu07g00658 604 Gene3D ANTH domain 161 310 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Tsu07g00658 604 SUPERFAMILY ENTH/VHS domain 4 93 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00658 Tsu-Chr7 5235312 5237268 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00658 - - gmx:100787076 904.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00658 07 5235312 5237268 Tsu07g00658 07 5235312 5237268 ECH