Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00642 atgaggcTACATACATTTGTAATAATTTCAACTTTATTGCTAATACAAATGAGCCTAATTCTTGCTGATGTTGGTACTGCTGCTTCTTATGGACCTCCATATATACCTACTGCTTGTGATGGAAATAGGAGAGAGCAGTTTCCACCAGGAAATATATTTGTGGCAGTAAATGAAGGGTTATGGGATAACGGTGCAGCATGTGGAAGAAGATACAGAGTAAGATGTGTGAGTGGAATCAATAAGCCATGCAAAGGTGGTACTAGTATTGATGTTAAAGTTGTTGATTCTATTACTTGTACAAAATCCTCTTCATGCCCTCATACTTTCCACATGTCAAATGAAGCCTTTGCAGCTATCTCTCGTTTCCCTCatgcaaatatcaatattgAATATATTCAGATATGA 405 0.3506 MRLHTFVIISTLLLIQMSLILADVGTAASYGPPYIPTACDGNRREQFPPGNIFVAVNEGLWDNGAACGRRYRVRCVSGINKPCKGGTSIDVKVVDSITCTKSSSCPHTFHMSNEAFAAISRFPHANINIEYIQI 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00642 134 Pfam Lytic transglycolase 55 131 IPR009009 -
Tsu07g00642 134 SUPERFAMILY Barwin-like endoglucanases 12 131 IPR036908 -
Tsu07g00642 134 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 25 134 IPR007112 -
Tsu07g00642 134 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 2 133 - -
Tsu07g00642 134 PANTHER RLPA-LIKE PROTEIN, DOUBLE-PSI BETA-BARREL-RELATED 2 133 - -
Tsu07g00642 134 Gene3D - 23 134 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00642 Tsu-Chr7 5079923 5080571 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00642 - - mtr:MTR_3g107500 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00642 07 5079923 5080571 Tsu07g00642 07 5079923 5080571 ECH