Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00640 ATGGAAGCTTCTTCCGGCATGGTTGCTGGCTCCCACAATCGTAACGAGCTTGTTCGGATTCGTCATGATTCTTCAGACAGCGGGAAACCATTGAAGAATTTGAATGGACAAAACTGTCAAATATGTGGTGAGAATGTTGGATTGACAGCAACTGGTGATCTGTTTGTTGCTTGTAATGAGTGTGGTTATCCAGTTTGTCGTCCTTGTTATGAATATGAGCGAAAAGATGGGAATCAATCTTGTCCTCAGTGCAAAACTAGATACAAAAGACACAaagGGAGTGCTAGAGTGAAtggagatgatgatgaagatgatggtgatgatataGAGAATGAATTCAATTACACACAAGGAAATACTAAATCGAGGACACAGTGGGACGATGATGCTGAcctttcttcatcttctagacGCGAATATCAGCAACCGATTCCACTTCTCACCAATGGACAGACGATGTCTGGTGAGATCCCTACGCCCGATAATCAATCGGTCCGAACAACCTCAGGTCCTTTGGGCCCGTCTGAGAAATCGCACTCACTTCCCTATATCGATCCAAGGCTACCAGTGCCGGTGAGAATTGTGGATCCATCAAAGGACTTAAATTCTTATGGTTTGGGAAATGTCGACTGGAAGGAAAGGGTTGAAGGTTGGAAGCTGAAGCACGAGAAAAATATGGTACAAATGACTGGTAGATATGCTGAGGGGAAaagtggaggaggaggagacATTGAAGGGACTGGTTCTAATGGAGAAGAACTTCAAATGGTTGATGATGCACGACAACCTATGAGTCGGATTGTACCTATTTCTTCATCTCAGCTGACCCCTTATCGTGTTGTTATCGTACTCCGGCTGATAATTCTTGGTTTCTTCTTACAATATCGTGTAACTCACCCGGTTAAAGATGCATACCCACTGTGGTTGACATCAGTTATCTGTGAGATTTGGTTTGCCTTATCTTGGATTTTGGATCAGTTTCCCAAATGGTCTCCTATTAATCGCGAGACTTATCTTGATAGGCTTGCTATAAGATATGATCGTGAAGGAGAACCATCACAGTTGGCTCCTGTTGACATTTTTGTTAGTACAGTGGACCCTCTCAAAGAGCCGCCTCTTGTAACTGCAAATACTGTTTTGTCTATACTTGCTGTTGATTACCCTGTCGACAAGGTTTCCTGCTATGTATCAGATGATGGTTCAGCTATGTTGACTTTTGAAGCCTTATCTGAAACAGCCGAGTTTGCAAAGTTGTGGGTGCCCTTTTGCAAAAAGCACAATATTGAGCCAAGAGCACCTGAATTTTATTTTGCTCAGAAGATTGATTACTTAAAGGACAAGATTCAACCCTCTTTTGTTAAGGAGCGACGAGCAATGAAGAGAGAATATGAAGAATTCAAAGTAAGGATCAATAGCTATGTGGCCAAAGCTCAGAAGACGCCAGAGGAAGGTTGGACAATGCAGGATGGAACTCCTTGGCCTGGAAATAATTCTAGGGATCATCCTGGAATGATTCAGGTGTTTTTAGGTCATAGTGGAGGACTTGATACAGATGGTAATGAGCTTCCTAGGCTTGTTTATGTTTCTCGTGAAAAGCGACCAGGTTTCCAACATCACAAGAAGGCTGGAGCTATGAATGCATTGATTCGAGTTTCTGCTGTCTTGACCAACGGTGCATATCTTTTGAATGTTGATTGTGATCACTATTTCAATAATTGTAAAGCTCTTAAAGAAGCAATGTGTTTCATGATGGATCCTGCTTACGGAAAGAAGACATGCTATGTGCAATTTCCTCAGAGATTTGATGGCATTGATTTGCACGATCGATATGCCAATCGCAATATTGTCTTCTTCGATATCAACATGAAAGGTCATGATGGTATTCAGGGTCCGGTCTATGTGGGAACTGGTTGCTGTTTCAATAGGCAAGCTTTGTATGGTTATGATCCTGTTTTGACTGAGGAAGATCTCGAACCTAACATTATTGTGAAGAGTTGTTGGGGTTCTAGAAAGAAGGGAAGGGGTGGCAACAAGAAGTATGGTGACAAGAAGAGGGGTGTTAAAAGAACTGAATCCACCATTCCCATATTTAATATGGAGGATGACGAGGGTGTTGAAGGTTATGACGAGGAAAGGTCGCTTCTAATGTCTACCAAGAGCTTGGAGAAGCGTTTCGGACAGTCACCAGTTTTTATTGCCGCTACCTTATATGAGCAGGGTGGCATTCCACCTGCAACCAATCCTGCAACTCTTCTTAAGGAGGCAATCCATGTTATCAGTTGTGGTTATGAAGACAAGACAGAATGGGGCAAAGAGATTGGATGGATCTATGGTTCTGTGACTGAAGATATCTTGACTGGGTTTAAGATGCATGCACGTGGTTGGATTTCCGTCTATTGCATGCCACTTCGTCCAGCATTTAAGGGATCTGCACCCATCAATCTTTCTGACCGTCTCAATCAAGTGCTTCGGTGGGCCTTGGGTTCTATCGAGATTTTCCTTAGCAGGCATTGTCCCTTATGGTATGGCTACAATGGCAGGATGAGGCCTCTCATGAGACTGGCCTATATCAACACAATTGTCTACCCCTTTACCTCAATTCCATTGATTGCGTATTGTACGCTACCTGCATTTTGTCTTATCACAAATAAGTTTATTATTCCCGAGATAAGTAACTTTGCAAGTATGTGGTTTATTCTCCTCTTTATCTCTATTTTTACTACTTCGATCCTCGAGCTTAGGTGGAGTGGTGTCGGTATAGAAGACTGGTGGAGAAATGAACAGTTTTGGGTTATCGGTGGAACATCCGCACATCTTTTCGCTGTGTTCCAAGGTCTTCTCAAAGTACTTGCAGGTATCGACACAAATTTTACCGTTACATCAAAGGCATCAGATGAAGATGGGGACTTTGCCGAGCTTTATGTGTTCAAATGGACATCCCTTCTCATCCCTCCTACAACAGTACTTATTGTGAATTTGATAGGTATTGTGGCTGGTGTATCCTATGCCATAAACAGCGGTTACCAATCTTGGGGTCCACTATTTGGAAAGCTCTTCTTTGCTATATGGGTCATTGCTCATTTATACCCTTTCTTGAAGGGTCTTTTGGGAAAATCAAACCGTACCCCGACTATCGTTATTGTCTGGTCGATTCTCCTTGCTTCTATATTCTCGTTGTTGTGGGTGAGGATTGACCCCTTCATCAAGGATCCCAACAAAGCATCATCCAATGGTCAATGTGGTATCAACTGTTAG 3255 0.4175 MEASSGMVAGSHNRNELVRIRHDSSDSGKPLKNLNGQNCQICGENVGLTATGDLFVACNECGYPVCRPCYEYERKDGNQSCPQCKTRYKRHKGSARVNGDDDEDDGDDIENEFNYTQGNTKSRTQWDDDADLSSSSRREYQQPIPLLTNGQTMSGEIPTPDNQSVRTTSGPLGPSEKSHSLPYIDPRLPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKHEKNMVQMTGRYAEGKSGGGGDIEGTGSNGEELQMVDDARQPMSRIVPISSSQLTPYRVVIVLRLIILGFFLQYRVTHPVKDAYPLWLTSVICEIWFALSWILDQFPKWSPINRETYLDRLAIRYDREGEPSQLAPVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFAKLWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINSYVAKAQKTPEEGWTMQDGTPWPGNNSRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNCKALKEAMCFMMDPAYGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINMKGHDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDLEPNIIVKSCWGSRKKGRGGNKKYGDKKRGVKRTESTIPIFNMEDDEGVEGYDEERSLLMSTKSLEKRFGQSPVFIAATLYEQGGIPPATNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISVYCMPLRPAFKGSAPINLSDRLNQVLRWALGSIEIFLSRHCPLWYGYNGRMRPLMRLAYINTIVYPFTSIPLIAYCTLPAFCLITNKFIIPEISNFASMWFILLFISIFTTSILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYVFKWTSLLIPPTTVLIVNLIGIVAGVSYAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGKSNRTPTIVIVWSILLASIFSLLWVRIDPFIKDPNKASSNGQCGINC 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00640 1084 MobiDBLite consensus disorder prediction 75 184 - -
Tsu07g00640 1084 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 112 IPR013083 -
Tsu07g00640 1084 SUPERFAMILY Nucleotide-diphospho-sugar transferases 376 658 IPR029044 -
Tsu07g00640 1084 Pfam Cellulose synthase 358 1075 IPR005150 GO:0016020|GO:0016760|GO:0030244
Tsu07g00640 1084 CDD mRING-HC-C4C4_CesA_plant 37 87 - -
Tsu07g00640 1084 SUPERFAMILY RING/U-box 23 111 - -
Tsu07g00640 1084 PANTHER CELLULOSE SYNTHASE 19 1084 - -
Tsu07g00640 1084 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 516 658 IPR029044 -
Tsu07g00640 1084 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 19 1084 - -
Tsu07g00640 1084 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Tsu07g00640 1084 MobiDBLite consensus disorder prediction 136 175 - -
Tsu07g00640 1084 Pfam Zinc-binding RING-finger 29 105 IPR027934 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00640 Tsu-Chr7 5061948 5068770 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00640 1 1082 Glycosyltransferase AT4G32410 85.161 0.0 1877
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00640 K10999 - gmx:100798193 2045.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00640 07 5061948 5068770 Tsu07g00640 07 5061948 5068770 ECH