Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00615 ATGATGTCCAAGTCTCTATATCTTTCCTTCCAATTCCAAATAATCATCCTCCTCTCAACACTGTTCATCCACTTCTCTCAAGCTGACGTTGGCACTGCTTCCCATTATGGACCTCCGTTTTTACCTACGGCGTGTTTTGGGGGAGATGCGTCGCAATTTCCATCGAGCAATATGTTTGGTTCAGCAGGAGAAGGTATATGGGACAATGGAGCAGCATGTGGAAGGCTGTATGAGGTGAGATGTATAAGTGCAGCAGTACCTAGAACTTGCATTCCTGGTCAAACAATTCAGATTAAGATTGTTGATAGGGCACAATCCTCTGTCTCTAGGCCTTCTTCAAGTGATACTTCTATGGTCCTCTCCACCACTGCCTTTCAGATCATTGCAAATGTTTCTTCATCTTTGATTAACATTGAATTTCAACAggtttga 432 0.4236 MMSKSLYLSFQFQIIILLSTLFIHFSQADVGTASHYGPPFLPTACFGGDASQFPSSNMFGSAGEGIWDNGAACGRLYEVRCISAAVPRTCIPGQTIQIKIVDRAQSSVSRPSSSDTSMVLSTTAFQIIANVSSSLINIEFQQV 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00615 143 SUPERFAMILY Barwin-like endoglucanases 16 143 IPR036908 -
Tsu07g00615 143 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 42 143 IPR007112 -
Tsu07g00615 143 Pfam Lytic transglycolase 66 139 IPR009009 -
Tsu07g00615 143 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 9 143 - -
Tsu07g00615 143 Gene3D - 26 143 IPR036908 -
Tsu07g00615 143 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 9 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00615 Tsu-Chr7 4896169 4900132 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00615 - - gmx:100803494 219.935