Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00612 ATGTCGTTTGGGTCTTCTCTGTTATCTCCTCCACCGCACGTTGTTTACCGTAAACGTAACAGAACCTCTCGCTTCAAAGTCACTGCAAACAACGTTCCCGATTTCCTCTCTGCTGACTGGTTTGAATCTCGCAATAAAAAACCAATTGGTCCAAGATTAGATTTCACTGCAGAAGATGCTGTTCATCATCAGCTTGAAGCTTTGAAGTATAATGATCAGCCTCTTCAAGATTATGGAATTGAAGTCATGTACAGATTTGCTGGATTTGATCCTTTTGAAAGATCAACATATTTTGGCCCATTCTTTGATCTTGGTCAGTTCGAAAGGTTCAGACGTATTTTTCACCATTCTACTTACCGAGTCTTATTGGGTCACAAGGAAAGAAAGATCATGAGCAGTTTGTTTGTGGAGGAGAACAAATATAAGCAGCGGATTTGGGTTCGAGGAAGTCGACCAGAGGAAGAGGAGATATTTCAATTTACAATGGTTCAGAGGGTTGGTGGTTGTTGGGATGGTTATTGGCTGACTGAGTCTCTGCTTAACGACAAGGATGCATTTTCTGAAATTTGCACCACTATAAGAAGCTGGTGCCTCCAAACAGAATACAACATACTTAGCATAGTTACATACATGGAAGGTGGTGAACTGAGAGCGGCGAGTGGGCGCATAGGGAGCTCAAGTATATGGAGAAGTGGCGCGGTTGATGTGTTTTCAGGATCTTCAAGAAgggatgatgatgaacaagaGCTTCAATGGGCTGCTATTGAGAAGCTTCCAACTTATCTACGTATGACTAGAGGTATACTCAACGAAGAACAAGGCGAACAATCTGTAGAGATTGATATCAACAAACTTGGACCACTACAGAGGAAGAATTTAGTGGAGAGGCTTGTTAAGATTTCTGAGCAAGATAATGAGAAGTTCTTGTTGAAGTTAAGACAACGCATTGATCGGGTTGGACTTGATTTTCCGACAATTGAAGTACGATTTGAGCACCTGAATGTTGAAGCTGAAGCTTGTGTGGGAAGCAGGGCATTGCCAACAATCCTCAACTTCTCCATTAATTTGTTGGAGGGGTTCGTGAATTTTCTTCACCTTATCCCTAGTCGAAAGAAGCCGCTAACAGTTCTTCATGATGTTAGTGGAATCATCAAGCCTAAAAGAATGACACTGCTCTTAGGTCCTCCAAGTTCCGGAAAGACTACATTGTTGTTGGCACTGGCTGGAAGACTCGGTAAAGATCTAAAACTTTCGGGGCGAGTTGCGTATAATGATCACGGAATGGAAGAATTTGTGCCGCAGAGAACATCAGCTTACATAAGTCAAACTGATTTGCACATAGGAGAATTGACAGTCAGAGAAACATTAGCCTTTTCAGCAAGGTGTCAAGGGATCGGAACTCGTTACGATATGCTGGCAGAATTATCAAGAAGAGAGAAAGCTGAAAACATTAAGCCAGATCCTGATCTTGATATTTATATGAAGGCTGAAGCACTAGAAGGCCAAGAAACCAACATAGTTACAGATTATATAATTAAGATTTTGGGACTAGATGTTTGTGCTGACACCATGGTAGGGGATGACATGATTCGAGGTATTTCAGGCGGACAAAGAAAACGAGTCACAACTGGTGAGATGCTAGTTGGACCATCAAGAGCACTTTTCATGGACGAAATATCAACTGGTTTGGATAGTTCCACCACATTCCAAATGATTAATTCACTAAGACAATCCATCCAAATTCTGAATGGAACAGCTCTCATCTCTCTTCTCCAACCAACACCTGAAACTTACGAGTTATTCGACGACATAATTGTCCTCTCAGACGGACAAATTGTGTATCAAGGTCCAAGGGAAAACGTCCTTGAATTCTTTGAACATGTTGGTTTCAAATGTCCAGAGAGAAAAGGAGTAGCAGACTTTTTACAAGAAGTAACATCAAGAAAAGATCAAGAACAGTACtggaaaaataaagatgaacCATATAACTTTATCACTGTTAGAGAATTTGCTGAAGCATTTCAGTTGTTTCACATTGGTCAAAAACTAGGTGACGAACTTGCTACTCCATTTGATACTTCCAAAGGCCATCCTGCTGTTTTAACCAAAAACAAGTATGGTGTGAGCAAAAAAGAACTGTTAAAAGCTTGCGTGTCAAGAGAACTCTTACTTATGAAAAGGAATTCGTTCGTCTATATTTTCAAGATGTGGCAGTTGATTTTCACCGGCATCGTAACAATGACGATGTTTCTACGAACTGAGATGCACCGGAATACAGAAGCAGATGGTGGGATTTATATGGGTGCCCTATTCTTCATACTAATTGTAATTACATTTAATGGATATGCGGAGCTATCATTGTTCATCGTGAAACTCCCGGTTTTCTATAAGCAAAGGGACCTTCTTTTTTTCCCTGCTTGGGCATACTCTTTGCCTACATGGATCCTTAAGATTCCTATAAGTTTTATAGAAGTTGGTGTTTGGGTTGTGTTGACTTACTATGTTATAGGATTTGATCCAAGTTTTGAAAGTTTCATCAAACAGTACTTTTTGCTAGTTTGTATCAACCAGATGGCATCTGCACTTTTTCGATTTATTGGCGCAGTTGGGAGGAACGTCATTGTTGCAAACACATTTGGATCATTTGCTTtgattgcagttttggtcctgGGTGGATTTATCCTATCTAGAGATGATGTGAAGAAGTGGTGGCTATGGGGTTACTGGGTCTCGCCGATGATGTATGGACAGAATGCTATAGCTGTGAATGAATTCCTTGGAAAGAGTTGGGCACATGTTCCACCTAATTCAACAGAACCATTAGGAGTGCAGATCTTGAAGTCGCGCGGCCTTTTCCCTGAAGCGTACTGGTATTGGTTTGGAGTTGGAGCTTCCATTGGATACATGTTTCTATTCAacttccttttccctttggcCTTACATTATCTTGATGCATTTGGTAAACCACAAGCTTTAATATCGGACGAAGCCTTGGCTGAGAGAAATGCTGCCACTTCTGGAAACAACGAAATTATTGAACTGTCTTCTAAATTAGATGGTTCTTCAGCCAAAGGAAATGCAAGTCAAAGAAGTTTTTCTTCAACGACGCTATCAGCAAAAGTGGGCAGCAGCGTTAGTGCAGCTGATCACAGCAAAAAGCGGGGGATGGTTCTTCCTTTCACACCCCTTTCTATCACTTTTGATGAAATCGGATATGAGGTGGACATGCCACAGGAAATGAAGGCCAAAGGCATTCTTGAAGATCGACTTGAACTTTTGAAGGGTGTTAATGGAGCTTTTAGACCAGGAGTTCTGACAGCTCTAATGGGTATAAGTGGAGCTGGTAAAACAACTCTGATGGATGTGTTGTCTGGAAGGAAAACAACAGGATATATTCAAGGAGATATAACAATATCTGGGTACCCTAAAAAGCAAGAAACGTTTGCTCGCATATCAGGATATTGTGAACAAACTGATATCCACTCTCCTCATGTTACTGTCTATGAATCTCTTGTTTATTCTGCTTGGCTCCGGTTACCCCCTGAGGTTGATTCTGCCACAAGAAAGATGTTCATTGAGGAAGTTATGGAGCTGATAGAGCTGACTTCAATAAGAGAAGCCTTGGTTGGATTGCCTGGTGTGAATGGTCTGTCCACGGAGCAGCGCAAGAGGTTAACAATTGCAGTTGAACTTGTTGCGAATCCATCTATTATATTCATGGATGAACCTACCTCTGGCCTTGATGCAAGAGCTGCTGCTATAGTAATGAGAACAGTGAGGAATACAGTGGACACTGGGCGAACGGTTGTCTGCACAATTCACCAGCCTAGTATTGATATATTTGATGCTTTTGATGAGCTACTTCTCTTGAAGCGTGGAGGAGAAGAAATATACGTGGGGCCGTTGGGCCGACAATGTTCTCATCTGATAAATTACTTTGAGGGAATTAATGGAGTGCCAAAAATCAAGAATGGTTATAACCCTGCCACTTGGATGTTGGAGGTTACTTCAGAAGCACAAGAAGCAGCTCTTGGAGTTAATTTCTCTGAGATATACAAGAATTCTGACTTATATATGAGAAACAAGACCTTGATCGAGGAACTAAGTGTCCCTCCAGAGGGTTCTAAAGACTTGTACTTCACAACACAGCACTCACAGTCTTTCTTAACCCAATGTATGGCTTGTCTTTGGAAGCAGCACCTATCATACTGGCGAAATCCTCCATATAGTGCAGTGAGACTTTTATTCacaacaatcatagctttgttGTTCGGGACAATATTTTGGGATATTGGCTCTAAAAGGGGTAGAAGACAAGATATATTTAACGCGATGGGATCCATGTATGCCGCAGTCCTCTTCATAGGAGTGCAAAATGCTACAACAGTGCAACCAGTTGTAGTCATTGAGAGAACAGTTTTCTATAGAGAAAAAGCTGCTGGAATGTACTCAGCATTGCCATATGCATTTGGACAGGTTGCTGTTGAGATCCCATACATATTCATACAGAGTCTTGTATATGGGGTTATAGTGTATATCATGATTGGTTTTGAAAGGACACCTGCCAAATTCTTTTGGTATCTCTTCTTCATGTTCTTCACATTGCTATATTTCACCTTATTTGGAATGATGCTTGCCGGTGCTACACCGGATCACAACGTTGCTGCTATAGTTTCCTTTGGCTTCTACATTCTATGGAACCTTTTCTCAGGATTCGTTATTCCCCGAACTAGGATGCCAATATGGTGGAGATGGTTTTTCTGGATTTGTCCTATCGCTTGGACCCTATACGGCTTAGTTACTACACAATTTGGCGACGTTAAAGATATTTTGGATACTGGAGAGACAGTGGAAGAGTTTGTTATGAATTATTTTGGGTATAGAGATGATTTCAAAGGGGTAGCTGCAGCTGTGGTTGTTAGTTTATCGCTAATCTTCGGATCTAGCTTTGCCTATTCAATTAAGGAATTTAATTTCCAAAAAAGATGA 4989 0.4031 MSFGSSLLSPPPHVVYRKRNRTSRFKVTANNVPDFLSADWFESRNKKPIGPRLDFTAEDAVHHQLEALKYNDQPLQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTYRVLLGHKERKIMSSLFVEENKYKQRIWVRGSRPEEEEIFQFTMVQRVGGCWDGYWLTESLLNDKDAFSEICTTIRSWCLQTEYNILSIVTYMEGGELRAASGRIGSSSIWRSGAVDVFSGSSRRDDDEQELQWAAIEKLPTYLRMTRGILNEEQGEQSVEIDINKLGPLQRKNLVERLVKISEQDNEKFLLKLRQRIDRVGLDFPTIEVRFEHLNVEAEACVGSRALPTILNFSINLLEGFVNFLHLIPSRKKPLTVLHDVSGIIKPKRMTLLLGPPSSGKTTLLLALAGRLGKDLKLSGRVAYNDHGMEEFVPQRTSAYISQTDLHIGELTVRETLAFSARCQGIGTRYDMLAELSRREKAENIKPDPDLDIYMKAEALEGQETNIVTDYIIKILGLDVCADTMVGDDMIRGISGGQRKRVTTGEMLVGPSRALFMDEISTGLDSSTTFQMINSLRQSIQILNGTALISLLQPTPETYELFDDIIVLSDGQIVYQGPRENVLEFFEHVGFKCPERKGVADFLQEVTSRKDQEQYWKNKDEPYNFITVREFAEAFQLFHIGQKLGDELATPFDTSKGHPAVLTKNKYGVSKKELLKACVSRELLLMKRNSFVYIFKMWQLIFTGIVTMTMFLRTEMHRNTEADGGIYMGALFFILIVITFNGYAELSLFIVKLPVFYKQRDLLFFPAWAYSLPTWILKIPISFIEVGVWVVLTYYVIGFDPSFESFIKQYFLLVCINQMASALFRFIGAVGRNVIVANTFGSFALIAVLVLGGFILSRDDVKKWWLWGYWVSPMMYGQNAIAVNEFLGKSWAHVPPNSTEPLGVQILKSRGLFPEAYWYWFGVGASIGYMFLFNFLFPLALHYLDAFGKPQALISDEALAERNAATSGNNEIIELSSKLDGSSAKGNASQRSFSSTTLSAKVGSSVSAADHSKKRGMVLPFTPLSITFDEIGYEVDMPQEMKAKGILEDRLELLKGVNGAFRPGVLTALMGISGAGKTTLMDVLSGRKTTGYIQGDITISGYPKKQETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSATRKMFIEEVMELIELTSIREALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKRGGEEIYVGPLGRQCSHLINYFEGINGVPKIKNGYNPATWMLEVTSEAQEAALGVNFSEIYKNSDLYMRNKTLIEELSVPPEGSKDLYFTTQHSQSFLTQCMACLWKQHLSYWRNPPYSAVRLLFTTIIALLFGTIFWDIGSKRGRRQDIFNAMGSMYAAVLFIGVQNATTVQPVVVIERTVFYREKAAGMYSALPYAFGQVAVEIPYIFIQSLVYGVIVYIMIGFERTPAKFFWYLFFMFFTLLYFTLFGMMLAGATPDHNVAAIVSFGFYILWNLFSGFVIPRTRMPIWWRWFFWICPIAWTLYGLVTTQFGDVKDILDTGETVEEFVMNYFGYRDDFKGVAAAVVVSLSLIFGSSFAYSIKEFNFQKR 1662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00612 1662 Pfam ABC-transporter N-terminal 281 352 IPR029481 -
Tsu07g00612 1662 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1089 1301 IPR027417 -
Tsu07g00612 1662 PANTHER ABC TRANSPORTER G FAMILY MEMBER 39-LIKE ISOFORM X2 218 1662 - -
Tsu07g00612 1662 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1074 1317 IPR003439 GO:0005524
Tsu07g00612 1662 Pfam ABC-2 type transporter 713 925 IPR013525 GO:0016020|GO:0140359
Tsu07g00612 1662 Pfam ABC-2 type transporter 1390 1604 IPR013525 GO:0016020|GO:0140359
Tsu07g00612 1662 Pfam ABC transporter 377 559 IPR003439 GO:0005524
Tsu07g00612 1662 Pfam Plant PDR ABC transporter associated 930 993 IPR013581 -
Tsu07g00612 1662 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 361 634 IPR003439 GO:0005524
Tsu07g00612 1662 Gene3D - 364 669 IPR027417 -
Tsu07g00612 1662 Pfam ABC-2 type transporter 592 645 IPR043926 GO:0140359
Tsu07g00612 1662 Gene3D - 1082 1306 IPR027417 -
Tsu07g00612 1662 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 373 634 IPR027417 -
Tsu07g00612 1662 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 278 415 IPR027417 -
Tsu07g00612 1662 SMART AAA_5 1102 1294 IPR003593 -
Tsu07g00612 1662 SMART AAA_5 386 618 IPR003593 -
Tsu07g00612 1662 CDD ABCG_PDR_domain2 1062 1300 IPR034003 -
Tsu07g00612 1662 Pfam ABC transporter 1093 1245 IPR003439 GO:0005524
Tsu07g00612 1662 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 218 1662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00612 Tsu-Chr7 4871088 4884021 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00612 K08711 - gmx:100804030 2521.5