Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00602 ATGTTTAAGCAATTCCTAAGTAAACTTCCTCGCAAATCGTCAAAATCCGAGTCGGACGAGTCACCCCGTGGCGACTCGTCTGGCCGGAGCGAGTCACCTCGAGCAAAAAACAACAGGTCACACGGCGGAAATGAAGGTGGTAAAAGTAACGCCGGTAAAAGGAACTCCTCGGCGGCAGTTTTTCCGACGGGCTCCGTGTCGTTAATTGAACCGTTGGTGCCGTTTAAGGATGTTTCTAGCTCAGAAAAAATGAACCTTTTTGTGAGCAAGTTGAGTCTTTGTTGTGTGGCGTTTGATTTCACCGATCCTGCTAAGAACGTTGTGGAAAAAGATGTTAAGAGAAGAACTTTGGTTGAActtgttgattttgtttcatCTTTTGGTTCATCAAGGTTTAGTGAACCAGCTATTCTTGCAATGTGTAGAATGTGTGCTATCAATCTCTTTCGCGTTTTCCCACCAAATTATCGGGCTAATAATCGAGGTGGTGGCGGTGAAAATGACGATGATGAACCGTCTTTTGATCCTGCTTGGCCTCATCTTCATCTTGTTTATGAATTATTGCTTAAATTTATAACATCTTCTTGCCTTGATGCTAAGGTTGCAAAAAAGTATTTTGACCATTCCTTTATTTCGTCATTGTTGGAGTTGTTTGATTCGGAGGATCCTAGGGAAAGGGATTGTTTGAAGACAATTCTGCATAGAGTTTATGGAAAATTCATGGTTCATAGACCTTTTATTCGGAAATCGATTAACAATGTGTTTTATAAGTTTGTGTTTGAGACTCAGAAACATAATGGGATTGCTGAGTTGTTGGAGATTTTTGGGAGTATAATAAGCGGATTTGCTTTACCATTGAAAGAAGAACACAAAATTTTCTTGTGGAGAGTTTTGATTCCTTTGCACAAACCTAGATCTATGGGGGTTTACTTTCAACAATTGTCTTATTGTGTTACACAGTTTATAGAGAAAGAGCCGAAGATGGCTAGCGTTGTGATAAGGGGTTTGTTGAAATATTGGCCAATAACACATAGTCAGAAAGAGGTGATGTTCCTTGGAGAATTGGAAGAAATTTTGGAAACAATTAACATGGTAGAGTTCCAAAAGGTCATGGTACCATTGTTTTGGCGAATTGGATATTGCATTAGCAGTTTACACTTTCAGgtaTCTGAAAGAGCCCTTTACTTGTGGAACAATGACCACATTGTCAATTTGATTGCTCACAACCGTCAGGTGATACTACCTACCATATTTCCAGCTCTGGAGAGGAATTCTCAAAGCCACTGGAACCCGGCAGTGCTCAACTTAACTCATAATGTTAGAAAGATGTTTGTGGAGATGGATGAGAAACTCTTCCTTACTAGTCAATCTCAGTATAAGGAGGAAGAAGCAATGCTAACCTTGGAATCCGAGAAACGAAACGAAGCTTGGAAACAATTAGAACATACAGCCAGTCTCAAACCTGTAGTTGGAAACACCGCTGTTTTAGTGTCTCCGATTTGA 1503 0.3985 MFKQFLSKLPRKSSKSESDESPRGDSSGRSESPRAKNNRSHGGNEGGKSNAGKRNSSAAVFPTGSVSLIEPLVPFKDVSSSEKMNLFVSKLSLCCVAFDFTDPAKNVVEKDVKRRTLVELVDFVSSFGSSRFSEPAILAMCRMCAINLFRVFPPNYRANNRGGGGENDDDEPSFDPAWPHLHLVYELLLKFITSSCLDAKVAKKYFDHSFISSLLELFDSEDPRERDCLKTILHRVYGKFMVHRPFIRKSINNVFYKFVFETQKHNGIAELLEIFGSIISGFALPLKEEHKIFLWRVLIPLHKPRSMGVYFQQLSYCVTQFIEKEPKMASVVIRGLLKYWPITHSQKEVMFLGELEEILETINMVEFQKVMVPLFWRIGYCISSLHFQVSERALYLWNNDHIVNLIAHNRQVILPTIFPALERNSQSHWNPAVLNLTHNVRKMFVEMDEKLFLTSQSQYKEEEAMLTLESEKRNEAWKQLEHTASLKPVVGNTAVLVSPI 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00602 500 MobiDBLite consensus disorder prediction 1 56 - -
Tsu07g00602 500 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 498 IPR002554 GO:0000159|GO:0007165|GO:0019888
Tsu07g00602 500 SUPERFAMILY ARM repeat 85 479 IPR016024 -
Tsu07g00602 500 PIRSF PP2A_B56 4 497 IPR002554 GO:0000159|GO:0007165|GO:0019888
Tsu07g00602 500 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 498 - -
Tsu07g00602 500 MobiDBLite consensus disorder prediction 10 38 - -
Tsu07g00602 500 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 74 484 IPR002554 GO:0000159|GO:0007165|GO:0019888
Tsu07g00602 500 Gene3D - 80 483 IPR011989 -
Tsu07g00602 500 MobiDBLite consensus disorder prediction 39 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00602 Tsu-Chr7 4793194 4796108 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00602 K11584 - gmx:100808283 830.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00602 07 4793194 4796108 Tsu07g00602 07 4793194 4796108 ECH