Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu07g00565 | ATGGATAATCAACCGATTCAAAATCAAGTTCAACCGCCACGTgacgaagaagaagaggaagaagattcTTCCaagatggaagaagaagagttGATTTCAAAGGTTAACAAACTCATGGATAAAATCACTTCTTCTCCTGATAACCCTAAACCTAACGTTCTTCATGCTCTTGCATCCATTCTCGAAACTcaagaatcaaaATACATGGATGAGAATGCTCATTCTTCTTCTACTAATGCCCGTGCTGCTCATAATATCGGTCGCCTCGGGAGTATACTTCggGAGAATGATGATTTCTTTGAGTTAATATCTTTGAAGTTTCTGTCAGAAAGTGGATACTCGACTTCGGTTCGAGCTGCTGCTGTTAGACTTCTCTTGTGCTGTTCTCTAACTTGGATTTATCCTCATGTTTTTGAAGAAGCAGTCCTTGAGAACTTGAGAAATTGGGCGACGGATGATAATACTAGGTTGTCTGTTGAGGAGCAAAATATGAAGCATGGTCCTGAGAGAAAGGAGGCCTCAGAATCTGAAATGTTGAAAGCATATTCTACTGGACTACTTGCCGTGTGTTTGATTGGAGGAGGTCAAATAGTGGAAGATGTATTGACAACTGGCTTGTCAGCTAAGCTCATGCGTTATCTTCGTTTGCGTGTGCTGGGCGAGACAAGTGGCAGCCAGAAAGATATTAGTCATTTATCAGAGAACAAACATTCATCTGGGAATACTTCAGCGAGAGGTAGAGACGATGGCCGTGGAAGGTTTCGCCAGCTCCTGGAATCAAGTCATTTCGATGATACAAGGATGATTGAAGACGGATCTTTAGATGACCAAGCTCCTGAACGGGGTCAGGATAGAAGCGTTAGTGGGCAAGCTTGCCAAAAAGATCCTCGGATAGATGGTGAACCACCTGATGGACTCAACGAAGGTGCTGATGTCTGTGAGGTTGATTCTGATGGGGAGGAAAGATGGCACTGTAGAGATATTTGTGATGGAAGGATAAAATATGGTGAGCATGAAGACAATGCTAGAGACGAATCTTCAAGGCGGCGTACTAACCGTGGATGGGGAAGATCTAGGGGGAAAGGAAGGGTCAATGACGGGCCAGTAGAAGGCGAACCTGTTTTGTCATCTGCTGGTTCTGCCAGTCGATTAGGACAGGGGAGGAGTGTTAGAGATAGGAGGAATGCTGAAGCTAAGCGGGTACCTGATTCTAAGAAGACTCTTACCAGTACCATTTCTGAGGCTTTGATTTCCGAAAGAGAGGATAATGATGATTGTTTCCAAGAGTGCCGTATTGGAAGTAAAGATATCTCAGATCTTGTTCGGAAAGCAGTCAAAGCCGCTGAAGCTGAAGCTAGATCAGCCAATGCACCTGAAGAAGCTGTCAAAGCAGCTGGTGATGCTGCTGCTGACCTTGTTAAAACTGCAGCTTCAGAGGAATATAAATCCACCAACGATGAAGAAGCAGCTGTTTTGGCTGCTTCGAGAGCTGCATCAACTGTTATCGATGCTGCATCTGCTGTTGAAGTTTCAAGGAGCTCTGTCTGCATCAATAACGAGACAGAGAATGTTAGTGGCAGAGAAGCAGAATCTAGTGAGGATGTTGAAGATTATTTCATCCCAGACACTCCAACACTTACACAATTGAGGGAAAAATATTGCATTCAGTGTCTTTCGTTACTTGGAGAATATGTTGAAGTTCTTGGACCTGTATTGCATGAGAAGGGGGTTGATGTTTGTCTTGGACTTCTGCAGCAAAATTCTAAACATCAGGAGCCATCCAAGGTTGCTTTTGTGTTGCCCGATGTCATGAAGCTGATATGTGCTTTGGCTGCCCATAGGAAATTTGCTGCACTATTTGTGGACCGTGGTGGAATGCAAAAGCTGCTTGCTGTACCTAGAATGGCTCAAACATTCTTTGGCCTTTCTTCTTGTCTGTTTACTATTGGTTCCCTACAGGGTATAATGGAACGGGTTTGTGCTCTTCCATCCGATGTCATTTATCATGTGGTTGAGTTGGCTCTCCAACTCATTGAGTGCAATCAAGACCTAGCCCGGAAGAACGCGGCATTGTTTTTTGCTGCCGCATTTGTCTTCAGAGCAGTTCTCGATGCTTTTGACTCTCAGAATGGGTTACAGAAATTACTGGGCCTTCTCAATGAAGCTGCCTCCATAAGATCAGGAGTAACTTCTGGAGCCTTGGGCTCATCTAACTCAGGGTCTCTTCGAAATGATAGAACTTCATCTGCAGAAGGGCTGACATCATCTGAGAAGCAGGTCGCCTATCACACTTGTGTTGCTCTGCGGCAATATTTCAGAGCACACCTCATATTATTAATAGATTCTATTCGTCCAAACAAAAGCAATCGTAGTGCTGCTAGAAATATTCCAAGTACAAGGGCTGCTTACAAGCCACTAGATATTAGTAATGAGGCAATGGATGCAGTATTCCTACAATTACAAAAAGATCGAAAGCTAGGTCCTGCATTTGTAAGAACAGGTTGGCGGGAAGTTGAGAATTTCTTGGCATCTAACGGGCATATTACTATGTTAGAATTGTGTCAGGCCCCACCTGTGGAGCGATATCTACATGATTTGCTTCAGTATGCATTGGGGGTTTTGCAAATTGTTTCATTGGTACCTAGCAGTCGTAAGATGATTGTAAATGCAACATTAAGCACCAACCGTGCTGGTATTGCTGTAATTTTGGATGCTGCAAATATTGTCAGTAGTCACGTGGACCCTGAGATAATTCAACCAGCATTAAATGTTTTGGTAAACCTTGTTTGCCCTCCTCCCTCAATCAGCAATAAACCACCTGTAGTGTCACAAGGCCAGCAAATCTCTAATGGTGCTCTCTCGGAGACTAGAGATAGAAATGCTGAACGTATTGATCCCAGGGAGAGGAATGGAGAGCCCAGTTCTGCTGCACTTACGACGCAATCTGTGAATGCTACTCCCCAGACTCCCGTTCCCTCTGCAAGTTCAGGCTTGGTCGGTGACCGAAGAATATCTTTGGGTGCAGGAGCACGCTGTGCTGGTCTGGCTACACAGCTGGAACAAGGATATCATCAGGCAAGAGAGGCTGTCCGTAATAATAATGGTATAAAGGTTCTTCTGCATCTCCTCCAACCTCGTATATATTCACCTCCTGCTGCTCTGGACTGTCTTCGTGCTCTAGCTTGCCGAGTCCTGCTTGGATTGGCCAGAGATGATACTATTGCTCATATATTGACTAAACTTCAGGTCGGGAAAAGACTGTCAGAACTAATTCGGGATTCAGGCAGTACAACACTCGGAACAGAACAGGGTAGGTGGCAAGCTGAACTATCCCAGGCTGCAATTGAGTTAATTGGGATTGTGGCTAATTTAGGGCGTGCAAGTACATTAGTTGCTAGTGATGCAGCTACACCTACATTAAGGCGCATAGAAAGGGCTGCTATAGCTGCTGCCACTCCTATTACTTACCCTTCAAGGGAACTCTTGCTCTTAATTCATGAACACTTACAGGCATCTGGATTGGGACAAACTGCTTCTTTATTGCTTAAAGAGGCTCAGTTAACTCCTTTGCCATCTTTACTTGCTCCATCTTCTCTTTCACAACAGCCCACAACACAGGAAGCTTCTTCAACACAAATTCAGTGGCCTCTTGGTCGTACTCCTAGTGGATTTCTCACTAGCAAATTAAAGTCTAACTCAAAGAATGAGGATGCTTCCTGGAAAGGTGATCCCGTCTCTGCAAAGAAAAAGTCGCTAACTTTTTCATCATCTTTTGGTTCCCATACAAGACACCAAGTTGTTGACTCTCGGCAGTCATCATCCAAAAAATGGTCACGTACTGGGAAAGAGTCTTCAGAAACAAGTATGATAGAGGATCCATCTGAATCTTCAGTGAAACATAACGCTGAAACTCAGTTCAAGACTCCAATCACCTTGCCGTCCAAACGAAAGTTATCGGATTTAAAGGATATATCAATGTTTTCATCATCTGCAAAGCGACTAAATGTTGGGGACCAGGGACTTCGCTCTCCTATTTGCTCAAGTACAGTTCGTAAAAGCAGCCTTCATACTGATGCTATTGGGCTTTTCACACCAAGTAATCTGAGGAGTCAACACGGCCGTTGTCCAGCTGACTATGTGGATGAAAATCAGTACTGCATCTCAAATCTAGGTCAGATGACACCATCCTCCCAAGTAGTGAATGACCTTCAGCCCAACAACCCCGAGCGCGTGACACTAGATTCTCTAGTTGTTCAGTATCTGAAACATCAACATCGCCAATGCCCAGCCCCCATTACCACCCTTCCTCCAATATCTCTTCTGCACCCACATGTTTGTCCTGAACCTAAGCGAAGCCTGGATGCACCCTCTAATGTGACTGCCCGGCTTGGTACCCGTGAATTTAAGTTTACGTATGGTGGAGTACATGGTAATCGCAAGGATCGTCAATTTGTTTTTAGTCGGTTTAGGCCGTGGCGCACTTATCGGGACGACGCCGGTGCGTTATTAACGTGCATTACTTTTGTTGGAGACTCTTCTCATATTGCTGTTGGTAGCCACACCGGAGAACTCAAATTTTTTGATTCCAACAACAATAATGTGGTGGAGAGCTTCACAGGTCACGAGGCTCCTCTGACCCTAGTTCAGTCTTTTGTTTCTGGCGAGACCCAATTGTTGCTCTCTTCATGCTCTAAAGATGTTAAGCTCTGGGATGCAACATCTATTTTAGCTGGTCCCACGCGTTCATTTGAAGGATGCAAGGCTGCCAGGTTTAGTAATTCCGGAAAATCATTCGCTGCCTTGTCATCAGAATCTGCAGGACGGGAAATCCTGTTATATGATATCCAAGAAGGCAAGTTAGAAAGAACATTGTCAGATACTCTCGCAACTTCTACAGGACGGGGTCATGCTTATTCTTTAATCCACTTTAGCCCTGATGATGAAAGGCTACTTTATAATGGTGTCTTATGGGACCCGCGAAGGCCTGAGCCTGTTTATCGCTTTGATCAGTTCACTGATTATGGAGGTGGTGGCTTTCATCCTGCTGGAAATGAGGTTATTATAAACTCCGAAGTCTGGGATCTGCGCAAGTTCAGACTTCTACGTAGTGTAGCATCATTAGATCAGACAGCAATAACATTCAATGCTCGTGGTGATGTTATGTATGCAATCTTAAGGAGGAATCTTGAGGATGTAATGTCAGCAATGCATGCGCGCCGCATTAAGCATCCACTTTTTTCAGCTTTTCGCACAGTGGATGCAATAAATTATTCTGACATTGCTACTATCCCTGTGGATCGTTgtgttcttgattttgcaaCTGAGCCAACAGATTCATTTGTTGGTTTGATTACCATGGATGATCAAGGTGATATGTATTCATCGGCCAGATCATATGAAATTGGTCGTCGGAGGCCAACTGATGATGATTCTGATCCTGATGATGCTGAAAGCgaggaggaagatgaagatgacGACGACGATGACGATGAAGATCCTCTTTTAGGCCCTGGTTTTGGTGGAGAAAGCGACAGTGATGCTGATGACATGAGCAATGACGATGATGATAGTGTAAGTGATCCTGACGACGACGATGATGACGATGGGGGTTTCATGATGAATGGTTTAGACTTTGATGGAAACGACTTATTGGATATTGTGACCGATGATGATGATAGTCAAGGACTTGATTCTGGAAGTAGTGACGACGATGACTTTTATACTTGA | 5727 | 0.4365 | MDNQPIQNQVQPPRDEEEEEEDSSKMEEEELISKVNKLMDKITSSPDNPKPNVLHALASILETQESKYMDENAHSSSTNARAAHNIGRLGSILRENDDFFELISLKFLSESGYSTSVRAAAVRLLLCCSLTWIYPHVFEEAVLENLRNWATDDNTRLSVEEQNMKHGPERKEASESEMLKAYSTGLLAVCLIGGGQIVEDVLTTGLSAKLMRYLRLRVLGETSGSQKDISHLSENKHSSGNTSARGRDDGRGRFRQLLESSHFDDTRMIEDGSLDDQAPERGQDRSVSGQACQKDPRIDGEPPDGLNEGADVCEVDSDGEERWHCRDICDGRIKYGEHEDNARDESSRRRTNRGWGRSRGKGRVNDGPVEGEPVLSSAGSASRLGQGRSVRDRRNAEAKRVPDSKKTLTSTISEALISEREDNDDCFQECRIGSKDISDLVRKAVKAAEAEARSANAPEEAVKAAGDAAADLVKTAASEEYKSTNDEEAAVLAASRAASTVIDAASAVEVSRSSVCINNETENVSGREAESSEDVEDYFIPDTPTLTQLREKYCIQCLSLLGEYVEVLGPVLHEKGVDVCLGLLQQNSKHQEPSKVAFVLPDVMKLICALAAHRKFAALFVDRGGMQKLLAVPRMAQTFFGLSSCLFTIGSLQGIMERVCALPSDVIYHVVELALQLIECNQDLARKNAALFFAAAFVFRAVLDAFDSQNGLQKLLGLLNEAASIRSGVTSGALGSSNSGSLRNDRTSSAEGLTSSEKQVAYHTCVALRQYFRAHLILLIDSIRPNKSNRSAARNIPSTRAAYKPLDISNEAMDAVFLQLQKDRKLGPAFVRTGWREVENFLASNGHITMLELCQAPPVERYLHDLLQYALGVLQIVSLVPSSRKMIVNATLSTNRAGIAVILDAANIVSSHVDPEIIQPALNVLVNLVCPPPSISNKPPVVSQGQQISNGALSETRDRNAERIDPRERNGEPSSAALTTQSVNATPQTPVPSASSGLVGDRRISLGAGARCAGLATQLEQGYHQAREAVRNNNGIKVLLHLLQPRIYSPPAALDCLRALACRVLLGLARDDTIAHILTKLQVGKRLSELIRDSGSTTLGTEQGRWQAELSQAAIELIGIVANLGRASTLVASDAATPTLRRIERAAIAAATPITYPSRELLLLIHEHLQASGLGQTASLLLKEAQLTPLPSLLAPSSLSQQPTTQEASSTQIQWPLGRTPSGFLTSKLKSNSKNEDASWKGDPVSAKKKSLTFSSSFGSHTRHQVVDSRQSSSKKWSRTGKESSETSMIEDPSESSVKHNAETQFKTPITLPSKRKLSDLKDISMFSSSAKRLNVGDQGLRSPICSSTVRKSSLHTDAIGLFTPSNLRSQHGRCPADYVDENQYCISNLGQMTPSSQVVNDLQPNNPERVTLDSLVVQYLKHQHRQCPAPITTLPPISLLHPHVCPEPKRSLDAPSNVTARLGTREFKFTYGGVHGNRKDRQFVFSRFRPWRTYRDDAGALLTCITFVGDSSHIAVGSHTGELKFFDSNNNNVVESFTGHEAPLTLVQSFVSGETQLLLSSCSKDVKLWDATSILAGPTRSFEGCKAARFSNSGKSFAALSSESAGREILLYDIQEGKLERTLSDTLATSTGRGHAYSLIHFSPDDERLLYNGVLWDPRRPEPVYRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRSVASLDQTAITFNARGDVMYAILRRNLEDVMSAMHARRIKHPLFSAFRTVDAINYSDIATIPVDRCVLDFATEPTDSFVGLITMDDQGDMYSSARSYEIGRRRPTDDDSDPDDAESEEEDEDDDDDDDEDPLLGPGFGGESDSDADDMSNDDDDSVSDPDDDDDDDGGFMMNGLDFDGNDLLDIVTDDDDSQGLDSGSSDDDDFYT | 1908 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu07g00565 | 1908 | MobiDBLite | consensus disorder prediction | 1846 | 1872 | - | - | |
| Tsu07g00565 | 1908 | MobiDBLite | consensus disorder prediction | 1275 | 1289 | - | - | |
| Tsu07g00565 | 1908 | SMART | Lish | 1157 | 1189 | IPR006594 | GO:0005515 | |
| Tsu07g00565 | 1908 | MobiDBLite | consensus disorder prediction | 1194 | 1245 | - | - | |
| Tsu07g00565 | 1908 | SMART | WD40_4 | 1488 | 1528 | IPR001680 | GO:0005515 | |
| Tsu07g00565 | 1908 | SMART | WD40_4 | 1531 | 1571 | IPR001680 | GO:0005515 | |
| Tsu07g00565 | 1908 | MobiDBLite | consensus disorder prediction | 387 | 404 | - | - | |
| Tsu07g00565 | 1908 | PANTHER | BNAA03G51310D PROTEIN | 323 | 1263 | - | - | |
| Tsu07g00565 | 1908 | MobiDBLite | consensus disorder prediction | 939 | 955 | - | - | |
| Tsu07g00565 | 1908 | MobiDBLite | consensus disorder prediction | 956 | 970 | - | - | |
| Tsu07g00565 | 1908 | PANTHER | BNAA03G51310D PROTEIN | 1247 | 1798 | - | - | |
| Tsu07g00565 | 1908 | MobiDBLite | consensus disorder prediction | 973 | 995 | - | - | |
| Tsu07g00565 | 1908 | PANTHER | VPRBP PROTEIN-RELATED | 20 | 265 | IPR033270 | GO:0016567 | |
| Tsu07g00565 | 1908 | MobiDBLite | consensus disorder prediction | 1260 | 1274 | - | - | |
| Tsu07g00565 | 1908 | MobiDBLite | consensus disorder prediction | 241 | 282 | - | - | |
| Tsu07g00565 | 1908 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
| Tsu07g00565 | 1908 | PANTHER | BNAA03G51310D PROTEIN | 20 | 265 | - | - | |
| Tsu07g00565 | 1908 | MobiDBLite | consensus disorder prediction | 339 | 408 | - | - | |
| Tsu07g00565 | 1908 | PANTHER | VPRBP PROTEIN-RELATED | 1247 | 1798 | IPR033270 | GO:0016567 | |
| Tsu07g00565 | 1908 | MobiDBLite | consensus disorder prediction | 225 | 317 | - | - | |
| Tsu07g00565 | 1908 | MobiDBLite | consensus disorder prediction | 1812 | 1835 | - | - | |
| Tsu07g00565 | 1908 | Gene3D | - | 1489 | 1813 | IPR015943 | GO:0005515 | |
| Tsu07g00565 | 1908 | MobiDBLite | consensus disorder prediction | 1194 | 1233 | - | - | |
| Tsu07g00565 | 1908 | SUPERFAMILY | WD40 repeat-like | 1490 | 1722 | IPR036322 | GO:0005515 | |
| Tsu07g00565 | 1908 | MobiDBLite | consensus disorder prediction | 225 | 240 | - | - | |
| Tsu07g00565 | 1908 | MobiDBLite | consensus disorder prediction | 731 | 753 | - | - | |
| Tsu07g00565 | 1908 | MobiDBLite | consensus disorder prediction | 1883 | 1908 | - | - | |
| Tsu07g00565 | 1908 | MobiDBLite | consensus disorder prediction | 1797 | 1908 | - | - | |
| Tsu07g00565 | 1908 | PANTHER | VPRBP PROTEIN-RELATED | 323 | 1263 | IPR033270 | GO:0016567 | |
| Tsu07g00565 | 1908 | MobiDBLite | consensus disorder prediction | 1290 | 1311 | - | - | |
| Tsu07g00565 | 1908 | MobiDBLite | consensus disorder prediction | 937 | 998 | - | - | |
| Tsu07g00565 | 1908 | MobiDBLite | consensus disorder prediction | 1260 | 1311 | - | - | |
| Tsu07g00565 | 1908 | ProSiteProfiles | LIS1 homology (LisH) motif profile. | 1157 | 1189 | IPR006594 | GO:0005515 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu07g00565 | K11789 | - | gmx:100796030 | 2739.14 |