Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00559 ATGGCTGATGATAAAGTAGTTGAGGAAGGTGAAAAGAAGGAAACAAAGACAAGTTCTACTGCTGCTgggaatgaaaagaagaagcgtAAAGGATTCATTTCTAGAATTTGGAATGGAATTTTTAGGTTACACGGCGATGATTTTGAGAAACGCCTTCAATATATTTCTAAAGAGGAAGCTACGGTTATCGCTAGAATGACTAGGAGATCGCGATCCAGGAGACAGGTGTCCCGGAATCTGATTGTATTTTCTGTTATATTTGAgGTCATTGCTGTAGGTTTTGCTATTATGACAACAAGATCAGTGGGTATAGATTGGAAAATGAGGGCGATCCGGGTTTTACCAATGTTTCTTTTGCCTGCACTATCAGCTGCTACTTATTCAGCATTTATCAGCTTCATAAGAATGTGTGATAACAGGGACCAGAATATTCTTGAAAAGCTTCGAGCTGAAAGGcaagaaaaaattgatgagCTCAAAGAAAGGACAAATTATTACACTACACAACAGCTTATTCAGAGATATGACCCAGACCCAGCCGCAAAGGCAGCTGCTGCAACTGTTTTGGCGTCTAAGTTGGGTTCAGACTCTGGTTTGAAATTGTACATGGGTGATGAATCCCATCTCAGTAGTGCTTCAACAGGGAAGAGCAATGATGTTGAACTTGTGCAGTCCTCTGGACTTCGAAATAGGAAACAAGTTCAAAATAGATCCACTAGTCCAAGGACAACTGCACAAAATTTTGCTGATCAACAATTAGTAGGTTCGGGGGAATTCGATCAAACCCAGACCTCTGAGTATGATCATCAACCTGTTGTTGTTGAACATCAACCTCAAAATTCAACCCCACAAGATGGAGGATGGATTGCAAGAATTGCAGCGTTACTTGTGGGTGAGGATCCAACACAGTCTTATGCTCTCATATGCGGTAACTGCCACATGCATAACGGTCTTGCTCGGAAGGAGGATTTCCCATTTATCACTTACTACTGCCCACATTGCCAGGCACTGAACAAACCAAAGCAATTGGACGGGAGCGTCTCCCCTAAGGCGGGGTCTGTGCAAACGGATGAGCGTATCCTGGCTCTTCCTTCCCCTAAGTTGAGGACTCCAAAAACAGGTGATAGTGAGGCAGTTTTAAATGCTAGCACTTCTGCTGCAGAGAGCATAATCACAAGCGATAGTCCCGTAAATGCTATCCCTGAGATCGAAGAGGTATCAGAAAGGACAAATTTAGAGGAGAAAACTGATTGA 1254 0.4163 MADDKVVEEGEKKETKTSSTAAGNEKKKRKGFISRIWNGIFRLHGDDFEKRLQYISKEEATVIARMTRRSRSRRQVSRNLIVFSVIFEVIAVGFAIMTTRSVGIDWKMRAIRVLPMFLLPALSAATYSAFISFIRMCDNRDQNILEKLRAERQEKIDELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGSDSGLKLYMGDESHLSSASTGKSNDVELVQSSGLRNRKQVQNRSTSPRTTAQNFADQQLVGSGEFDQTQTSEYDHQPVVVEHQPQNSTPQDGGWIARIAALLVGEDPTQSYALICGNCHMHNGLARKEDFPFITYYCPHCQALNKPKQLDGSVSPKAGSVQTDERILALPSPKLRTPKTGDSEAVLNASTSAAESIITSDSPVNAIPEIEEVSERTNLEEKTD 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00559 417 MobiDBLite consensus disorder prediction 1 26 - -
Tsu07g00559 417 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 288 338 IPR019273 -
Tsu07g00559 417 MobiDBLite consensus disorder prediction 395 417 - -
Tsu07g00559 417 PANTHER INTEGRAL MEMBRANE METAL-BINDING FAMILY PROTEIN (DUF2296) 15 414 - -
Tsu07g00559 417 Coils Coil 142 165 - -
Tsu07g00559 417 MobiDBLite consensus disorder prediction 224 252 - -
Tsu07g00559 417 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 15 414 IPR040115 GO:0071786
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00559 Tsu-Chr7 4373630 4377343 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00559 K23292 - gmx:100797087 537.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00763 01 6810295 6813332 Tsu07g00559 07 4373630 4377343 PCT