Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00555 ATGATGATAGGGTTAAGAAAACATACATTAAGGAGTCCTACGTTGATCATTGCATTGGCTTCTGTTGTCTGCATTGTTATGTTTCTTACAGTTTATGTTTATACACcaacaagaagaagaacaagtCCAGATAAATGCAGCTTTTATTCCTCTCAAGGTTGTCATACACGTGATCTGTTTCCAAATGCTTATTTTTCGAGGGAATTAACTGATCTCGAGATTGAATCTCGTGTTGTTGTTAAAGATTTACTCAACTTTGTTCCTCTTCAAacaaaaacacccaaaattGCATTTATGTTCTTGACTCCTGGTACATTGCCTTTCGAGAAACTCTGGCATCTGTTCTTTCAAGGGCaaaaatttttcaaattttatatacaTGCATCCAAAGAAAAACCAGTACATGCCAGCAAATATTTTGTTGGTCGAGAAATTCACAGCGAACCGGTTGGTTGGGGAAGTTTTGCGATGATTGAGGCAGAAAGAAGACTTTTGGCAAACGCACTTTTAGACCCCGATAACCAACATTTTGTTTTGCTATCTGATAGttgtATACCTGTACGTCGCTTTGAATTTGTGTACAACTACTTATTGTTTACAAATGTCAGCTTCATTGAATGCTATATTGATCCTGGCCCTCATGGTAACGGCCGATATATCGAGCATATGTTGCCTGAAGTAGAAATGAAGGATTTTCGGAAGGGTTCGCAGTGGTTCTCAATGAAGCGGCAACATGCTATTATAGTTATTGCAGATAGTCTCTATTTCACGAAATTCAAGTATCACTGCAGGCCAAATATGGAGGGAGGACGCAACTGTTATTCGGATGAGCATTACTTTCCAACATTTTTTAATATGCTTGATCCAGGTGGAATTTCGAATTGGTCGGTAACATATGTTGATTGGTCTGAAGGAAAATGGCATCCTAGATCATTCCGTGGTCATGATATTACATTTCGACTCCTTAAAGCCTTATCATCTATTAATGGAAGTCCACACATTACAAGTGAACCAAAGAGAAAAGTGTTAATAACACCTTGCATGTGGAACGGGTCGAGACGACCTTGTTATTTATTTGCCAGGAAGTTTTATCCAGATGCCTTGGATAAATTGATGTACCTTTTCGCTAATACTACTGCTTTCTAA 1146 0.3665 MMIGLRKHTLRSPTLIIALASVVCIVMFLTVYVYTPTRRRTSPDKCSFYSSQGCHTRDLFPNAYFSRELTDLEIESRVVVKDLLNFVPLQTKTPKIAFMFLTPGTLPFEKLWHLFFQGQKFFKFYIHASKEKPVHASKYFVGREIHSEPVGWGSFAMIEAERRLLANALLDPDNQHFVLLSDSCIPVRRFEFVYNYLLFTNVSFIECYIDPGPHGNGRYIEHMLPEVEMKDFRKGSQWFSMKRQHAIIVIADSLYFTKFKYHCRPNMEGGRNCYSDEHYFPTFFNMLDPGGISNWSVTYVDWSEGKWHPRSFRGHDITFRLLKALSSINGSPHITSEPKRKVLITPCMWNGSRRPCYLFARKFYPDALDKLMYLFANTTAF 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00555 381 Pfam Core-2/I-Branching enzyme 96 325 IPR003406 GO:0016020|GO:0016757
Tsu07g00555 381 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 7 379 IPR044174 GO:0016757
Tsu07g00555 381 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN 7 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00555 Tsu-Chr7 4356544 4360834 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00555 - - lja:Lj1g3v1965170.2 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00555 07 4356544 4360834 Tsu07g00555 07 4356544 4360834 ECH