Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00533 ATGTCTGATCAAGGAAGAACAACAGGATCCTACTCATCATATGGAGGATCCTATGGAACATCACCCTATGACACCAACAACACCAACCAACCCTCACGCCAAACTGTGAAGTTCTTAACAGCTGCTACAATTGGTGTTTCACTGTTGTTCTTGTCTGGACTAATCCTTGTTGGTACTGTCATAGGATTAATCATTGCAACACCTCTTCTTGTTCTCTTTAGTCCTATCCTAGTTCCAGCTGCTATAGTCCTATCACTCATTGTTGGTGGATTTGTGTTCTCTGGTGCTAGTGGTGTTGCTGCTATAGCTGCATTGTCATGGATATACAATTATGTTTCTGGTAACCGTCCTGCTGGTACTGATACTCTTGATTATGCTAAAGGGTTGATTACTGATAAGGCTAGGGATGTGAAGGACAGGTCTAAGGAATATGGAAATTATGCTCAGGGTAGAGCACAAGAGGCTACACAAGGCTCTTATTAA 483 0.4224 MSDQGRTTGSYSSYGGSYGTSPYDTNNTNQPSRQTVKFLTAATIGVSLLFLSGLILVGTVIGLIIATPLLVLFSPILVPAAIVLSLIVGGFVFSGASGVAAIAALSWIYNYVSGNRPAGTDTLDYAKGLITDKARDVKDRSKEYGNYAQGRAQEATQGSY 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00533 160 PANTHER OLEOSIN 25 158 - -
Tsu07g00533 160 ProSitePatterns Oleosins signature. 58 80 IPR000136 GO:0012511|GO:0016021
Tsu07g00533 160 MobiDBLite consensus disorder prediction 1 26 - -
Tsu07g00533 160 PANTHER OLEOSIN 25 158 IPR000136 GO:0012511|GO:0016021
Tsu07g00533 160 Pfam Oleosin 34 145 IPR000136 GO:0012511|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00533 Tsu-Chr7 4161999 4162481 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00533 26 151 Lipid Metabolism Gene Families AT2G25890 55.556 2.28e-36 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00533 - - gmx:100779237 211.846