Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00530 ATGGATCAACCAAAGAAACCTAACAAGATCAGAGACATCGTTAGACTTCAACAGATCCTAAAGAAATGGAGAAGAGCAGCCAATGATTCAAAAACAAACAGCAGCAACAATAGCAGCAGCAGCAGTAGTACTACTAGTAAAAGCATAAAATTTCTGAAAAGAACACTATCAATGTCCGAACGCGAAGGAGGAGGATCAAGTAACGCAGTTCCAAAAGGCTACCTAGCTGTTTGTGTTGGTGTAGACCTTAACAGGTTTGTTATACCAACTGAGTATTTGACTCATCAAGCCTTTCACATATTACTCAGAGAGGCTGAAGAAGAATTTGGGTTTGAACAAACTGGTGTTCTGAGAATTCCTTGTGAAGTATCTGTGTTTGAGAGTATCTTGAAGAAGGTGGAagaaaagggtagattttctaTTCAGAAATGTAGCTTaggtattgaaaaaatgatgggATACTGTTCCTCAAACCAGCTTGgttatcatcatcatcctcaaagTCCTATGTGCAGATAG 519 0.3487 MDQPKKPNKIRDIVRLQQILKKWRRAANDSKTNSSNNSSSSSSTTSKSIKFLKRTLSMSEREGGGSSNAVPKGYLAVCVGVDLNRFVIPTEYLTHQAFHILLREAEEEFGFEQTGVLRIPCEVSVFESILKKVEEKGRFSIQKCSLGIEKMMGYCSSNQLGYHHHPQSPMCR 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00530 172 MobiDBLite consensus disorder prediction 29 47 - -
Tsu07g00530 172 MobiDBLite consensus disorder prediction 24 47 - -
Tsu07g00530 172 Pfam Auxin responsive protein 28 131 IPR003676 GO:0009733
Tsu07g00530 172 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 172 IPR003676 GO:0009733
Tsu07g00530 172 PANTHER OSJNBA0060N03.10 PROTEIN 6 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00530 Tsu-Chr7 4147974 4148492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00530 3 172 Calmodulin-binding Proteins AT2G24400 53.552 1.05e-54 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00530 K14488 - gmx:100500385 266.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00530 07 4147974 4148492 Tsu01g00803 01 7232798 7233199 PCT